Age | Commit message (Collapse) | Author | Files | Lines | |
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2023-04-20 | Fix and rebuild documentation, see NEWS | Johannes Ranke | 1 | -0/+0 | |
I had to fix the two pathway vignettes, as they did not work with the released version any more. So they and the multistart vignette which got some small fixes as well were rebuilt. Complete rebuild of the online docs with the released version. The documentation of the 'hierarchial_kinetics' format had to be fixed as well. | |||||
2023-04-16 | Complete rebuild of static docs | Johannes Ranke | 1 | -0/+0 | |
2023-02-17 | Update online docs, fix bug that surfaced | Johannes Ranke | 1 | -0/+0 | |
2023-02-17 | Update benchmark results for 7950X | Johannes Ranke | 1 | -0/+0 | |
2023-02-17 | Rethink versioning and remove 7950X benchmarks | Johannes Ranke | 1 | -0/+0 | |
I will add benchmark data for 1.2.0, 1.2.2 and 1.2.3 for better comparison | |||||
2023-02-17 | Finish adapting to upcoming deSolve | Johannes Ranke | 1 | -0/+0 | |
2023-02-13 | WIP adapting to new deSolve with faster lsoda | Johannes Ranke | 1 | -0/+0 | |
2023-01-09 | Prebuilt PDF vignettes, summary_listing | Johannes Ranke | 1 | -0/+0 | |
2022-11-24 | Start online docs of the development version | Johannes Ranke | 1 | -0/+0 | |
2022-11-17 | Complete update of online docs for v1.2.0 | Johannes Ranke | 1 | -0/+0 | |
2022-11-15 | Import saemix for easier profiling, update online docs | Johannes Ranke | 1 | -0/+0 | |
2022-11-14 | Update online docs | Johannes Ranke | 1 | -0/+0 | |
2022-11-01 | Update online docs | Johannes Ranke | 1 | -0/+0 | |
2022-09-16 | Improve docs and update pkgdown | Johannes Ranke | 1 | -0/+0 | |
2022-08-10 | Change dev branch used for docs, update static docs | Johannes Ranke | 1 | -0/+0 | |
2022-07-22 | Update static docs | Johannes Ranke | 1 | -0/+0 | |
2022-07-14 | Improve readability of benchmark code shown in vignette | Johannes Ranke | 1 | -0/+0 | |
2022-07-12 | Rerun benchmarks on desktop computer | Johannes Ranke | 1 | -0/+0 | |
2022-07-08 | Store DLL info in mkinmod objects for performance | Johannes Ranke | 1 | -0/+0 | |
Thanks to Tomas Kalibera for his analysis of the problem on the r-package-devel mailing list and for the suggestion on how to fix it. See the current benchmark vignette for the new data on mkin 1.1.1 with R 4.2.1, with unprecedented performance. | |||||
2022-07-01 | Sensitivity of AIC values in DMTA vignette to BLAS version | Johannes Ranke | 1 | -0/+0 | |
2022-07-01 | Rerun benchmarks with R 4.2.1 and openblas-serial | Johannes Ranke | 1 | -0/+0 | |
After confirming that lapack versus atlas versus openblas results are quite similar, and therefore not responsible for the differences between R 4.1.3 and R 4.2.1 | |||||
2022-07-01 | Update benchmark article in online docs | Johannes Ranke | 1 | -0/+0 | |
2022-07-01 | Add benchmarks on laptop with R 4.1.3 and 4.2.1 | Johannes Ranke | 1 | -0/+0 | |
2022-07-01 | Add R version to data in benchmark vignette | Johannes Ranke | 1 | -0/+0 | |
2022-05-18 | Remove outdated comment in FOCUS L vignette, update docs | Johannes Ranke | 1 | -0/+0 | |
This also adds the first benchmark results obtained on my laptop system | |||||
2022-03-02 | Make tests more platform independent, update docs | Johannes Ranke | 1 | -0/+0 | |
2021-03-31 | Bug fix in plot.mkinfit | Johannes Ranke | 1 | -0/+0 | |
In residual plots, use xlab and xlim if appropriate | |||||
2021-02-15 | Correct grant numbers in README, update docs | Johannes Ranke | 1 | -0/+0 | |
2021-02-15 | Improve README, introductory vignette and some other docsv1.0.3 | Johannes Ranke | 1 | -0/+0 | |
Also bump version to 1.0.3. | |||||
2021-02-03 | Prepare for v1.0.0v1.0.0 | Johannes Ranke | 1 | -0/+0 | |
- Improve authorship and copyright information - Prepare pkgdown config - Remove dependence on saemix as we need the development version which is not ready for CRAN - Temporarily remove saemix interface to check code coverage of the rest | |||||
2020-11-30 | Complete rebuild of static docs of dev version | Johannes Ranke | 1 | -0/+0 | |
2020-11-19 | Depend on parallel, doc improvements | Johannes Ranke | 1 | -0/+0 | |
By depending on parallel instead of importing it, functions to set up and stop a cluster are always available when mkin is loaded. The use of multicore processing in mmkin on Windows is now documented in the help file, which brings mkin closer to a version 1.0 #9. | |||||
2020-11-06 | Update benchmarks for dev version | Johannes Ranke | 1 | -0/+0 | |
2020-10-15 | Update online docs for release version | Johannes Ranke | 1 | -0/+0 | |
2020-10-08 | Fix issues for release | Johannes Ranke | 1 | -0/+0 | |
2020-05-27 | Change dev version label to info color | Johannes Ranke | 1 | -0/+0 | |
instead of the orange danger color. | |||||
2020-05-27 | Create up to date pkgdown docs in development mode | Johannes Ranke | 1 | -0/+0 | |
2020-05-14 | Test markdown link, article update due to .rmd extension | Johannes Ranke | 1 | -0/+0 | |
2020-05-13 | Further formatting improvement of benchmark vignette | Johannes Ranke | 1 | -0/+0 | |
Also, use .rmd extension instead of .Rmd for vignettes. | |||||
2020-05-12 | Update pkgdown | Johannes Ranke | 1 | -0/+0 | |
2020-05-12 | Improve formatting of benchmark vignette | Johannes Ranke | 1 | -0/+0 | |
2020-05-12 | Update vignettes and docs | Johannes Ranke | 1 | -0/+0 | |
2019-05-02 | Prepare for CRAN release | Johannes Ranke | 1 | -0/+0 | |
- Skip long running tests on CRAN as well to avoid timeout on winbuilder - Don't install benchmark results in the package, they are only needed in the git repository - Don't run example in man/add_err.Rd as it takes > 10 s on winbuilder - Rebuild docs |