From 0023df3c31fac29b5f9337ecd732a5dfd4d51a2d Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Mon, 19 Dec 2022 06:37:32 +0100 Subject: Template and spreadsheet for hierarchical kinetics The template only shows parent data evaluation without covariate models for now. The spreadsheet will also be useful for unit testing of the read_spreadsheet function. --- .Rbuildignore | 3 +++ 1 file changed, 3 insertions(+) (limited to '.Rbuildignore') diff --git a/.Rbuildignore b/.Rbuildignore index 24632401..0dcec29a 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -9,6 +9,9 @@ ^test.R$ ^mkin_.*\.tar\.gz ^mkin.tar$ +^inst/rmarkdown/templates/hier/skeleton/skeleton.pdf$ +^inst/rmarkdown/templates/hier/skeleton/skeleton_cache +^inst/rmarkdown/templates/hier/skeleton/skeleton_files ^vignettes/.build.timestamp$ ^vignettes/.*_cache$ ^vignettes/.*cache$ -- cgit v1.2.1 From 886c9ef013124aa954d960c655b349b5340ff154 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Mon, 19 Dec 2022 12:31:56 +0100 Subject: Rename template folder, create format Instead of rmarkdown::pdf_document, mkin::hierarchical_kinetics is used as a document format in the template. In this way, the template file can be freed from some R code and yaml options that the average user does not have to be aware of. --- .Rbuildignore | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) (limited to '.Rbuildignore') diff --git a/.Rbuildignore b/.Rbuildignore index 0dcec29a..1eb33577 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -9,9 +9,9 @@ ^test.R$ ^mkin_.*\.tar\.gz ^mkin.tar$ -^inst/rmarkdown/templates/hier/skeleton/skeleton.pdf$ -^inst/rmarkdown/templates/hier/skeleton/skeleton_cache -^inst/rmarkdown/templates/hier/skeleton/skeleton_files +^inst/rmarkdown/templates/hierarchical_kinetics/skeleton/skeleton.pdf$ +^inst/rmarkdown/templates/hierarchical_kinetics/skeleton/skeleton_cache +^inst/rmarkdown/templates/hierarchical_kinetics/skeleton/skeleton_files ^vignettes/.build.timestamp$ ^vignettes/.*_cache$ ^vignettes/.*cache$ -- cgit v1.2.1 From ae314cd8869765dd05f1ae44f4d73ae71f788c62 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Tue, 3 Jan 2023 17:42:15 +0100 Subject: Reflect changed name of dll directory in template --- .Rbuildignore | 1 + 1 file changed, 1 insertion(+) (limited to '.Rbuildignore') diff --git a/.Rbuildignore b/.Rbuildignore index 1eb33577..70eef830 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -12,6 +12,7 @@ ^inst/rmarkdown/templates/hierarchical_kinetics/skeleton/skeleton.pdf$ ^inst/rmarkdown/templates/hierarchical_kinetics/skeleton/skeleton_cache ^inst/rmarkdown/templates/hierarchical_kinetics/skeleton/skeleton_files +^inst/rmarkdown/templates/hierarchical_kinetics/skeleton/dlls ^vignettes/.build.timestamp$ ^vignettes/.*_cache$ ^vignettes/.*cache$ -- cgit v1.2.1 From 24eb77216700cf8b2f2bde3abad84c1f83f9e32a Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Mon, 9 Jan 2023 06:22:04 +0100 Subject: Prebuilt PDF vignettes, summary_listing --- .Rbuildignore | 2 ++ 1 file changed, 2 insertions(+) (limited to '.Rbuildignore') diff --git a/.Rbuildignore b/.Rbuildignore index 70eef830..7e13343b 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -28,6 +28,8 @@ ^vignettes/.*.synctex.gz ^vignettes/.*.toc$ ^vignettes/figure +^vignettes/prebuilt/*_dlls +^vignettes/prebuilt/*.pdf ^vignettes/FOCUS_Z.tex$ ^vignettes/mkin.tex$ ^vignettes/mkin_benchmarks.rda$ -- cgit v1.2.1