From ec574cff822a1238138c0aa69b3d1459bdc3dfa8 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Fri, 19 Jun 2015 17:46:11 +0200 Subject: Use odeintr instead of ccSolve for compiling models --- NEWS.md | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) (limited to 'NEWS.md') diff --git a/NEWS.md b/NEWS.md index 32ca3e45..d4b74f48 100644 --- a/NEWS.md +++ b/NEWS.md @@ -2,13 +2,13 @@ ## MAJOR CHANGES -- If the ccSolve package is installed, use a version of the differential equation model compiled from C code, which is a huge performance boost for models where only the deSolve method works. Compiled models using the Hockey Stick model (HS) are not supported (yet). -- `mkinmod()`: Create a list component $compiled in the list returned by mkinmod, if a version can be compiled from autogenerated C code (see above). -- `mkinfit()`: Set the default `solution_type` to `deSolve` when a compiled version of the model is present, except if an analytical solution is possible. +- `mkinmod()`: If the C++ compiler g++ is installed and eigenvalue based solution is not possible, produce a version of the differential equation model compiled from C code, which is a huge performance boost for models where only the deSolve method works. The integration method and its tolerances are set in the call to `mkinmod()` in this case. The compiled model is stored in an environment component $e in the list returned by mkinmod. +- `mkinfit()`: Set the default `solution_type` to `odeintr` when a compiled version of the model is present, except if an analytical solution is possible. ## MINOR CHANGES - Added a simple showcase vignette with an evaluation of FOCUS example dataset D +- Change the naming of the IORE rate constante from k.iore to k__iore to make int compatible with C++ # CHANGES in mkin VERSION 0.9-35 -- cgit v1.2.1