From e6f9e9ca89e35e610d9895b979f1351a47451db0 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Fri, 29 May 2020 16:05:11 +0200 Subject: Improve handling of warnings, reorganize tests --- R/summary_DFOP_FOCUS_C.txt | 82 ++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 82 insertions(+) create mode 100644 R/summary_DFOP_FOCUS_C.txt (limited to 'R/summary_DFOP_FOCUS_C.txt') diff --git a/R/summary_DFOP_FOCUS_C.txt b/R/summary_DFOP_FOCUS_C.txt new file mode 100644 index 00000000..ab64a588 --- /dev/null +++ b/R/summary_DFOP_FOCUS_C.txt @@ -0,0 +1,82 @@ +mkin version used for fitting: Dummy 0.0 for testing +R version used for fitting: Dummy R version for testing +Date of fit: Dummy date for testing +Date of summary: Dummy date for testing + +Equations: +d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 * + time)) / (g * exp(-k1 * time) + (1 - g) * exp(-k2 * time))) + * parent + +Model predictions using solution type analytical + +Fitted using test 0 model solutions performed in test time 0 s + +Error model: Constant variance + +Error model algorithm: OLS + +Starting values for parameters to be optimised: + value type +parent_0 85.10 state +k1 0.10 deparm +k2 0.01 deparm +g 0.50 deparm + +Starting values for the transformed parameters actually optimised: + value lower upper +parent_0 85.100000 -Inf Inf +log_k1 -2.302585 -Inf Inf +log_k2 -4.605170 -Inf Inf +g_ilr 0.000000 -Inf Inf + +Fixed parameter values: +None + +Results: + + AIC BIC logLik + 29.02372 30.00984 -9.511861 + +Optimised, transformed parameters with symmetric confidence intervals: + Estimate Std. Error Lower Upper +parent_0 85.0000 0.66620 83.1500 86.8500 +log_k1 -0.7775 0.03380 -0.8713 -0.6836 +log_k2 -4.0260 0.13100 -4.3890 -3.6620 +g_ilr 1.2490 0.05811 1.0870 1.4100 +sigma 0.6962 0.16410 0.2406 1.1520 + +Parameter correlation: +[1] "Correlation matrix is platform dependent, not tested" + +Backtransformed parameters: +Confidence intervals for internally transformed parameters are asymmetric. +t-test (unrealistically) based on the assumption of normal distribution +for estimators of untransformed parameters. + Estimate t value Pr(>t) Lower Upper +parent_0 85.00000 127.600 1.131e-08 83.15000 86.85000 +k1 0.45960 29.580 3.887e-06 0.41840 0.50480 +k2 0.01785 7.636 7.901e-04 0.01241 0.02568 +g 0.85390 83.310 6.221e-08 0.82310 0.88020 +sigma 0.69620 4.243 6.618e-03 0.24060 1.15200 + +FOCUS Chi2 error levels in percent: + err.min n.optim df +All data 2.661 4 5 +parent 2.661 4 5 + +Estimated disappearance times: + DT50 DT90 DT50_k1 DT50_k2 +parent 1.887 21.25 1.508 38.83 + +Data: + time variable observed predicted residual + 0 parent 85.1 85.003 0.09726 + 1 parent 57.9 58.039 -0.13912 + 3 parent 29.9 30.054 -0.15351 + 7 parent 14.6 13.866 0.73388 + 14 parent 9.7 9.787 -0.08657 + 28 parent 6.6 7.532 -0.93205 + 63 parent 4.0 4.033 -0.03269 + 91 parent 3.9 2.447 1.45348 + 119 parent 0.6 1.484 -0.88424 -- cgit v1.2.1