From ed2ab7bba07e3cb036782227fe27943f4b5583fa Mon Sep 17 00:00:00 2001
From: Johannes Ranke <jranke@uni-bremen.de>
Date: Tue, 3 Jan 2023 09:31:48 +0100
Subject: Improved skeleton for hierarchical fits

Now with working pathway fits using SFORB-SFO2 (only two parallel
metabolites instead of three) as the data for compound Ia was not
sufficient for a reliable fit.
---
 R/hierarchical_kinetics.R | 1 +
 1 file changed, 1 insertion(+)

(limited to 'R')

diff --git a/R/hierarchical_kinetics.R b/R/hierarchical_kinetics.R
index 70e0100a..a90dd619 100644
--- a/R/hierarchical_kinetics.R
+++ b/R/hierarchical_kinetics.R
@@ -31,6 +31,7 @@ hierarchical_kinetics <- function(..., keep_tex = FALSE) {
   fmt <- rmarkdown::pdf_document(...,
     keep_tex = keep_tex,
     toc = TRUE,
+    toc_depth = 3,
     includes = rmarkdown::includes(in_header = "header.tex"),
     extra_dependencies = c("float", "listing", "framed")
   )
-- 
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