From 95178837d3f91e84837628446b5fd468179af2b9 Mon Sep 17 00:00:00 2001
From: Johannes Ranke <jranke@uni-bremen.de>
Date: Tue, 4 Jun 2019 15:09:28 +0200
Subject: Additional algorithm "d_c", more tests, docs

The new algorithm tries direct optimization of the likelihood, as well
as a three step procedure. In this way, we consistently get the
model with the highest likelihood for SFO, DFOP and HS for all 12
new test datasets.
---
 docs/articles/FOCUS_D.html | 14 +++++++-------
 1 file changed, 7 insertions(+), 7 deletions(-)

(limited to 'docs/articles/FOCUS_D.html')

diff --git a/docs/articles/FOCUS_D.html b/docs/articles/FOCUS_D.html
index ba694065..698ccebc 100644
--- a/docs/articles/FOCUS_D.html
+++ b/docs/articles/FOCUS_D.html
@@ -30,7 +30,7 @@
       </button>
       <span class="navbar-brand">
         <a class="navbar-link" href="../index.html">mkin</a>
-        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.9.49.4</span>
+        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.9.49.5</span>
       </span>
     </div>
 
@@ -88,7 +88,7 @@
       <h1>Example evaluation of FOCUS Example Dataset D</h1>
                         <h4 class="author">Johannes Ranke</h4>
             
-            <h4 class="date">2019-05-08</h4>
+            <h4 class="date">2019-06-04</h4>
       
       
       <div class="hidden name"><code>FOCUS_D.Rmd</code></div>
@@ -166,10 +166,10 @@
 <p><img src="FOCUS_D_files/figure-html/plot_2-1.png" width="768"></p>
 <p>A comprehensive report of the results is obtained using the <code>summary</code> method for <code>mkinfit</code> objects.</p>
 <div class="sourceCode" id="cb11"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb11-1" title="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(fit)</a></code></pre></div>
-<pre><code>## mkin version used for fitting:    0.9.49.4 
+<pre><code>## mkin version used for fitting:    0.9.49.5 
 ## R version used for fitting:       3.6.0 
-## Date of fit:     Wed May  8 20:52:27 2019 
-## Date of summary: Wed May  8 20:52:27 2019 
+## Date of fit:     Tue Jun  4 15:03:18 2019 
+## Date of summary: Tue Jun  4 15:03:18 2019 
 ## 
 ## Equations:
 ## d_parent/dt = - k_parent_sink * parent - k_parent_m1 * parent
@@ -177,7 +177,7 @@
 ## 
 ## Model predictions using solution type deSolve 
 ## 
-## Fitted using 389 model solutions performed in 0.998 s
+## Fitted using 389 model solutions performed in 0.978 s
 ## 
 ## Error model:
 ## Constant variance 
@@ -305,7 +305,7 @@
 </div>
 
 <div class="pkgdown">
-  <p>Site built with <a href="https://pkgdown.r-lib.org/">pkgdown</a> 1.3.0.9000.</p>
+  <p>Site built with <a href="https://pkgdown.r-lib.org/">pkgdown</a> 1.3.0.</p>
 </div>
       </footer>
 </div>
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