From a9427a09abdf7ce9aaeae7c7190f90c8f2e5ef52 Mon Sep 17 00:00:00 2001
From: Johannes Ranke <jranke@uni-bremen.de>
Date: Mon, 15 Feb 2021 14:08:13 +0100
Subject: Improve README, introductory vignette and some other docs

Also bump version to 1.0.3.
---
 docs/articles/FOCUS_D.html | 22 +++++++++++-----------
 1 file changed, 11 insertions(+), 11 deletions(-)

(limited to 'docs/articles/FOCUS_D.html')

diff --git a/docs/articles/FOCUS_D.html b/docs/articles/FOCUS_D.html
index 786b2c47..f3a56065 100644
--- a/docs/articles/FOCUS_D.html
+++ b/docs/articles/FOCUS_D.html
@@ -31,7 +31,7 @@
       </button>
       <span class="navbar-brand">
         <a class="navbar-link" href="../index.html">mkin</a>
-        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.0.0</span>
+        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.0.3</span>
       </span>
     </div>
 
@@ -94,13 +94,13 @@
 
       
 
-      </header><div class="row">
+      </header><script src="FOCUS_D_files/header-attrs-2.6/header-attrs.js"></script><script src="FOCUS_D_files/accessible-code-block-0.0.1/empty-anchor.js"></script><div class="row">
   <div class="col-md-9 contents">
     <div class="page-header toc-ignore">
       <h1 data-toc-skip>Example evaluation of FOCUS Example Dataset D</h1>
                         <h4 class="author">Johannes Ranke</h4>
             
-            <h4 class="date">2021-02-03</h4>
+            <h4 class="date">Last change 31 January 2019 (rebuilt 2021-02-15)</h4>
       
       <small class="dont-index">Source: <a href="https://github.com/jranke/mkin/blob/master/vignettes/FOCUS_D.rmd"><code>vignettes/FOCUS_D.rmd</code></a></small>
       <div class="hidden name"><code>FOCUS_D.rmd</code></div>
@@ -185,10 +185,10 @@
 <p>A comprehensive report of the results is obtained using the <code>summary</code> method for <code>mkinfit</code> objects.</p>
 <div class="sourceCode" id="cb11"><pre class="downlit sourceCode r">
 <code class="sourceCode R"><span class="fu"><a href="https://rdrr.io/r/base/summary.html">summary</a></span><span class="op">(</span><span class="va">fit</span><span class="op">)</span></code></pre></div>
-<pre><code>## mkin version used for fitting:    1.0.0 
+<pre><code>## mkin version used for fitting:    1.0.3 
 ## R version used for fitting:       4.0.3 
-## Date of fit:     Wed Feb  3 17:32:13 2021 
-## Date of summary: Wed Feb  3 17:32:14 2021 
+## Date of fit:     Mon Feb 15 13:46:23 2021 
+## Date of summary: Mon Feb 15 13:46:23 2021 
 ## 
 ## Equations:
 ## d_parent/dt = - k_parent * parent
@@ -196,7 +196,7 @@
 ## 
 ## Model predictions using solution type analytical 
 ## 
-## Fitted using 401 model solutions performed in 0.161 s
+## Fitted using 401 model solutions performed in 0.162 s
 ## 
 ## Error model: Constant variance 
 ## 
@@ -239,11 +239,11 @@
 ## 
 ## Parameter correlation:
 ##                   parent_0 log_k_parent   log_k_m1 f_parent_qlogis      sigma
-## parent_0         1.000e+00    5.174e-01 -1.688e-01      -5.471e-01 -1.171e-06
-## log_k_parent     5.174e-01    1.000e+00 -3.263e-01      -5.426e-01 -8.481e-07
-## log_k_m1        -1.688e-01   -3.263e-01  1.000e+00       7.478e-01  8.209e-07
+## parent_0         1.000e+00    5.174e-01 -1.688e-01      -5.471e-01 -1.172e-06
+## log_k_parent     5.174e-01    1.000e+00 -3.263e-01      -5.426e-01 -8.483e-07
+## log_k_m1        -1.688e-01   -3.263e-01  1.000e+00       7.478e-01  8.205e-07
 ## f_parent_qlogis -5.471e-01   -5.426e-01  7.478e-01       1.000e+00  1.305e-06
-## sigma           -1.171e-06   -8.481e-07  8.209e-07       1.305e-06  1.000e+00
+## sigma           -1.172e-06   -8.483e-07  8.205e-07       1.305e-06  1.000e+00
 ## 
 ## Backtransformed parameters:
 ## Confidence intervals for internally transformed parameters are asymmetric.
-- 
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