From bbb74d4f60033899cd5cdd36aa70f157bc52209e Mon Sep 17 00:00:00 2001
From: Johannes Ranke <jranke@uni-bremen.de>
Date: Fri, 1 Nov 2019 12:19:03 +0100
Subject: Fix bug in yesterdays release, add methods for BIC

---
 docs/articles/FOCUS_D.html | 21 ++++++++++-----------
 1 file changed, 10 insertions(+), 11 deletions(-)

(limited to 'docs/articles/FOCUS_D.html')

diff --git a/docs/articles/FOCUS_D.html b/docs/articles/FOCUS_D.html
index f8c51e2d..42361b92 100644
--- a/docs/articles/FOCUS_D.html
+++ b/docs/articles/FOCUS_D.html
@@ -90,7 +90,7 @@
       <h1>Example evaluation of FOCUS Example Dataset D</h1>
                         <h4 class="author">Johannes Ranke</h4>
             
-            <h4 class="date">2019-09-19</h4>
+            <h4 class="date">2019-11-01</h4>
       
       
       <div class="hidden name"><code>FOCUS_D.Rmd</code></div>
@@ -170,8 +170,8 @@
 <div class="sourceCode" id="cb11"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb11-1" title="1"><span class="kw"><a href="https://rdrr.io/r/base/summary.html">summary</a></span>(fit)</a></code></pre></div>
 <pre><code>## mkin version used for fitting:    0.9.49.6 
 ## R version used for fitting:       3.6.1 
-## Date of fit:     Thu Sep 19 09:52:55 2019 
-## Date of summary: Thu Sep 19 09:52:56 2019 
+## Date of fit:     Fri Nov  1 10:10:44 2019 
+## Date of summary: Fri Nov  1 10:10:44 2019 
 ## 
 ## Equations:
 ## d_parent/dt = - k_parent_sink * parent - k_parent_m1 * parent
@@ -179,19 +179,18 @@
 ## 
 ## Model predictions using solution type deSolve 
 ## 
-## Fitted using 389 model solutions performed in 1.001 s
+## Fitted using 389 model solutions performed in 1.015 s
 ## 
 ## Error model: Constant variance 
 ## 
 ## Error model algorithm: OLS 
 ## 
 ## Starting values for parameters to be optimised:
-##                    value   type
-## parent_0      100.750000  state
-## k_parent_sink   0.100000 deparm
-## k_parent_m1     0.100100 deparm
-## k_m1_sink       0.100200 deparm
-## sigma           3.125504  error
+##                  value   type
+## parent_0      100.7500  state
+## k_parent_sink   0.1000 deparm
+## k_parent_m1     0.1001 deparm
+## k_m1_sink       0.1002 deparm
 ## 
 ## Starting values for the transformed parameters actually optimised:
 ##                        value lower upper
@@ -199,7 +198,6 @@
 ## log_k_parent_sink  -2.302585  -Inf   Inf
 ## log_k_parent_m1    -2.301586  -Inf   Inf
 ## log_k_m1_sink      -2.300587  -Inf   Inf
-## sigma               3.125504     0   Inf
 ## 
 ## Fixed parameter values:
 ##      value  type
@@ -298,6 +296,7 @@
   </div>
 
   <div class="col-md-3 hidden-xs hidden-sm" id="sidebar">
+
       </div>
 
 </div>
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