From b6e278759127dab5bb78bc3016926a66e8a9758f Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Thu, 14 May 2020 17:10:59 +0200 Subject: Test markdown link, article update due to .rmd extension --- docs/articles/FOCUS_L.html | 43 +++++++++++++++++++++++-------------------- 1 file changed, 23 insertions(+), 20 deletions(-) (limited to 'docs/articles/FOCUS_L.html') diff --git a/docs/articles/FOCUS_L.html b/docs/articles/FOCUS_L.html index 742718cb..df5c77c4 100644 --- a/docs/articles/FOCUS_L.html +++ b/docs/articles/FOCUS_L.html @@ -68,6 +68,9 @@
  • Example evaluation of NAFTA SOP Attachment examples
  • +
  • + Some benchmark timings +
  • @@ -97,10 +100,10 @@

    Example evaluation of FOCUS Laboratory Data L1 to L3

    Johannes Ranke

    -

    2020-05-12

    +

    2020-05-14

    - Source: vignettes/FOCUS_L.Rmd - + Source: vignettes/FOCUS_L.rmd + @@ -123,15 +126,15 @@ summary(m.L1.SFO)
    ## mkin version used for fitting:    0.9.50.2 
     ## R version used for fitting:       4.0.0 
    -## Date of fit:     Tue May 12 15:31:38 2020 
    -## Date of summary: Tue May 12 15:31:38 2020 
    +## Date of fit:     Thu May 14 17:07:14 2020 
    +## Date of summary: Thu May 14 17:07:14 2020 
     ## 
     ## Equations:
     ## d_parent/dt = - k_parent_sink * parent
     ## 
     ## Model predictions using solution type analytical 
     ## 
    -## Fitted using 133 model solutions performed in 0.03 s
    +## Fitted using 133 model solutions performed in 0.032 s
     ## 
     ## Error model: Constant variance 
     ## 
    @@ -224,8 +227,8 @@
     ## doubtful
    ## mkin version used for fitting:    0.9.50.2 
     ## R version used for fitting:       4.0.0 
    -## Date of fit:     Tue May 12 15:31:38 2020 
    -## Date of summary: Tue May 12 15:31:38 2020 
    +## Date of fit:     Thu May 14 17:07:14 2020 
    +## Date of summary: Thu May 14 17:07:14 2020 
     ## 
     ## 
     ## Warning: Optimisation did not converge:
    @@ -332,8 +335,8 @@
     
    summary(m.L2.FOMC, data = FALSE)
    ## mkin version used for fitting:    0.9.50.2 
     ## R version used for fitting:       4.0.0 
    -## Date of fit:     Tue May 12 15:31:39 2020 
    -## Date of summary: Tue May 12 15:31:39 2020 
    +## Date of fit:     Thu May 14 17:07:15 2020 
    +## Date of summary: Thu May 14 17:07:15 2020 
     ## 
     ## Equations:
     ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
    @@ -411,8 +414,8 @@
     
    summary(m.L2.DFOP, data = FALSE)
    ## mkin version used for fitting:    0.9.50.2 
     ## R version used for fitting:       4.0.0 
    -## Date of fit:     Tue May 12 15:31:39 2020 
    -## Date of summary: Tue May 12 15:31:39 2020 
    +## Date of fit:     Thu May 14 17:07:15 2020 
    +## Date of summary: Thu May 14 17:07:15 2020 
     ## 
     ## Equations:
     ## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 *
    @@ -421,7 +424,7 @@
     ## 
     ## Model predictions using solution type analytical 
     ## 
    -## Fitted using 572 model solutions performed in 0.13 s
    +## Fitted using 572 model solutions performed in 0.131 s
     ## 
     ## Error model: Constant variance 
     ## 
    @@ -514,8 +517,8 @@
     
    summary(mm.L3[["DFOP", 1]])
    ## mkin version used for fitting:    0.9.50.2 
     ## R version used for fitting:       4.0.0 
    -## Date of fit:     Tue May 12 15:31:39 2020 
    -## Date of summary: Tue May 12 15:31:40 2020 
    +## Date of fit:     Thu May 14 17:07:16 2020 
    +## Date of summary: Thu May 14 17:07:16 2020 
     ## 
     ## Equations:
     ## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 *
    @@ -623,8 +626,8 @@
     
    summary(mm.L4[["SFO", 1]], data = FALSE)
    ## mkin version used for fitting:    0.9.50.2 
     ## R version used for fitting:       4.0.0 
    -## Date of fit:     Tue May 12 15:31:40 2020 
    -## Date of summary: Tue May 12 15:31:40 2020 
    +## Date of fit:     Thu May 14 17:07:16 2020 
    +## Date of summary: Thu May 14 17:07:16 2020 
     ## 
     ## Equations:
     ## d_parent/dt = - k_parent_sink * parent
    @@ -687,15 +690,15 @@
     
    summary(mm.L4[["FOMC", 1]], data = FALSE)
    ## mkin version used for fitting:    0.9.50.2 
     ## R version used for fitting:       4.0.0 
    -## Date of fit:     Tue May 12 15:31:40 2020 
    -## Date of summary: Tue May 12 15:31:40 2020 
    +## Date of fit:     Thu May 14 17:07:16 2020 
    +## Date of summary: Thu May 14 17:07:16 2020 
     ## 
     ## Equations:
     ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
     ## 
     ## Model predictions using solution type analytical 
     ## 
    -## Fitted using 224 model solutions performed in 0.044 s
    +## Fitted using 224 model solutions performed in 0.043 s
     ## 
     ## Error model: Constant variance 
     ## 
    -- 
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