From 9ae42bd20bc2543a94cf1581ba9820c2f9e3afbd Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Thu, 20 Apr 2023 19:53:28 +0200 Subject: Fix and rebuild documentation, see NEWS I had to fix the two pathway vignettes, as they did not work with the released version any more. So they and the multistart vignette which got some small fixes as well were rebuilt. Complete rebuild of the online docs with the released version. The documentation of the 'hierarchial_kinetics' format had to be fixed as well. --- .../figure-html/unnamed-chunk-13-1.png | Bin 0 -> 363943 bytes .../figure-html/unnamed-chunk-14-1.png | Bin 0 -> 365867 bytes .../figure-html/unnamed-chunk-15-1.png | Bin 0 -> 363662 bytes .../figure-html/unnamed-chunk-20-1.png | Bin 0 -> 378667 bytes .../figure-html/unnamed-chunk-21-1.png | Bin 0 -> 372548 bytes .../figure-html/unnamed-chunk-22-1.png | Bin 0 -> 373913 bytes .../figure-html/unnamed-chunk-7-1.png | Bin 0 -> 373737 bytes .../figure-html/unnamed-chunk-8-1.png | Bin 0 -> 373913 bytes 8 files changed, 0 insertions(+), 0 deletions(-) create mode 100644 docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-13-1.png create mode 100644 docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-14-1.png create mode 100644 docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-15-1.png create mode 100644 docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-20-1.png create mode 100644 docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-21-1.png create mode 100644 docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-22-1.png create mode 100644 docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-7-1.png create mode 100644 docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-8-1.png (limited to 'docs/articles/prebuilt/2022_cyan_pathway_files') diff --git a/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-13-1.png b/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-13-1.png new file mode 100644 index 00000000..b969f2ff Binary files /dev/null and b/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-13-1.png differ diff --git a/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-14-1.png b/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-14-1.png new file mode 100644 index 00000000..60393da3 Binary files /dev/null and b/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-14-1.png differ diff --git a/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-15-1.png b/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-15-1.png new file mode 100644 index 00000000..b9a410f7 Binary files /dev/null and b/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-15-1.png differ diff --git a/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-20-1.png b/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-20-1.png new file mode 100644 index 00000000..cf921dab Binary files /dev/null and b/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-20-1.png differ diff --git a/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-21-1.png b/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-21-1.png new file mode 100644 index 00000000..ff732730 Binary files /dev/null and b/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-21-1.png differ diff --git a/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-22-1.png b/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-22-1.png new file mode 100644 index 00000000..e30011bc Binary files /dev/null and b/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-22-1.png differ diff --git a/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-7-1.png b/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-7-1.png new file mode 100644 index 00000000..4aad76df Binary files /dev/null and b/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-7-1.png differ diff --git a/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-8-1.png b/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-8-1.png new file mode 100644 index 00000000..e30011bc Binary files /dev/null and b/docs/articles/prebuilt/2022_cyan_pathway_files/figure-html/unnamed-chunk-8-1.png differ -- cgit v1.2.1