From 91c5db736a4d3f2290a0cc5698fb4e35ae7bda59 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Wed, 18 May 2022 21:26:17 +0200 Subject: Remove outdated comment in FOCUS L vignette, update docs This also adds the first benchmark results obtained on my laptop system --- docs/articles/web_only/benchmarks.html | 145 +++++++++++++++++++++------------ 1 file changed, 92 insertions(+), 53 deletions(-) (limited to 'docs/articles/web_only/benchmarks.html') diff --git a/docs/articles/web_only/benchmarks.html b/docs/articles/web_only/benchmarks.html index 2eea3cb2..058d43fa 100644 --- a/docs/articles/web_only/benchmarks.html +++ b/docs/articles/web_only/benchmarks.html @@ -43,7 +43,7 @@ Functions and data
  • - vignettes/web_only/benchmarks.rmd @@ -121,7 +121,7 @@

    Parent only:

     FOCUS_C <- FOCUS_2006_C
-FOCUS_D <- subset(FOCUS_2006_D, value != 0)
+FOCUS_D <- subset(FOCUS_2006_D, value != 0)
 parent_datasets <- list(FOCUS_C, FOCUS_D)
 
 t1 <- system.time(mmkin_bench(c("SFO", "FOMC", "DFOP", "HS"), parent_datasets))[["elapsed"]]
@@ -179,74 +179,83 @@
 
    
 
    Results
 
    
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    Currently, we only have benchmark information on one system, therefore only the mkin version is shown with the results below. Timings are in seconds, shorter is better. All results were obtained by serial, i.e. not using multiple computing cores.
    
 
    Benchmarks for all available error models are shown.
    
 
    
 
    Parent only
 
    
 
    Constant variance (t1) and two-component error model (t2) for four models fitted to two datasets, i.e. eight fits for each test.
    
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    mkin versiont1 [s]t2 [s]t1t2
 
    
 
 
    0.9.48.1Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.48.1
 3.610
 11.019
 
    
 
    0.9.49.1Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.49.1
 8.184
 22.889
 
    
 
    0.9.49.2Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.49.2
 7.064
 12.558
 
    
 
    0.9.49.3Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.49.3
 7.296
 21.239
 
    
 
    0.9.49.4Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.49.4
 5.936
 20.545
 
    
 
    0.9.50.2Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.50.2
 1.714
 3.971
 
    
 
    0.9.50.3Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.50.3
 1.752
 4.156
 
    
 
    0.9.50.4Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.50.4
 1.786
 3.729
 
    
 
    1.0.3Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 1.0.3
 1.881
 3.504
 
    
 
    1.0.4Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 1.0.4
 1.867
 3.450
 
    
 
    1.1.0Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 1.1.0
 1.938
 3.517
 
    Linux, Intel(R) Core(TM) i7-4710MQ CPU @ 2.50GHz, mkin version 1.1.01.6213.123
    
     
 
    
 
    
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    Constant variance (t3), two-component error model (t4), and variance by variable (t5) for three models fitted to one dataset, i.e. three fits for each test.
    
 
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    mkin versiont3 [s]t4 [s]t5 [s]t3t4t5
 
    
 
 
    0.9.48.1Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.48.1
 3.764
 14.347
 9.495
 
    
 
    0.9.49.1Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.49.1
 4.649
 13.789
 6.395
 
    
 
    0.9.49.2Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.49.2
 4.786
 8.461
 5.675
 
    
 
    0.9.49.3Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.49.3
 4.510
 13.805
 7.386
 
    
 
    0.9.49.4Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.49.4
 4.446
 15.335
 6.002
 
    
 
    0.9.50.2Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.50.2
 1.402
 6.174
 2.764
 
    
 
    0.9.50.3Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.50.3
 1.430
 6.615
 2.878
 
    
 
    0.9.50.4Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.50.4
 1.397
 7.251
 2.810
 
    
 
    1.0.3Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 1.0.3
 1.430
 6.344
 2.798
 
    
 
    1.0.4Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 1.0.4
 1.415
 6.364
 2.820
 
    
 
    1.1.0Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 1.1.0
 1.470
 6.508
 2.894
 
    Linux, Intel(R) Core(TM) i7-4710MQ CPU @ 2.50GHz, mkin version 1.1.03.31918.2097.773
    
     
 
    
 
    
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    Constant variance (t6 and t7), two-component error model (t8 and t9), and variance by variable (t10 and t11) for one model fitted to one dataset, i.e. one fit for each test.
    
 
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    mkin versiont6 [s]t7 [s]t8 [s]t9 [s]t10 [s]t11 [s]t6t7t8t9t10t11
 
    
 
 
    0.9.48.1Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.48.1
 2.623
 4.587
 7.52531.267
 
    
 
    0.9.49.1Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.49.1
 2.542
 4.128
 4.6325.636
 
    
 
    0.9.49.2Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.49.2
 2.723
 4.478
 4.8625.574
 
    
 
    0.9.49.3Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.49.3
 2.643
 4.374
 7.0207.365
 
    
 
    0.9.49.4Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.49.4
 2.635
 4.259
 4.7375.626
 
    
 
    0.9.50.2Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.50.2
 0.777
 1.236
 1.3322.987
 
    
 
    0.9.50.3Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.50.3
 0.858
 1.264
 1.3333.073
 
    
 
    0.9.50.4Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 0.9.50.4
 0.783
 1.282
 1.4863.105
 
    
 
    1.0.3Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 1.0.3
 0.763
 1.244
 1.4572.839
 
    
 
    1.0.4Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 1.0.4
 0.785
 1.252
 1.4662.826
 
    
 
    1.1.0Linux, AMD Ryzen 7 1700 Eight-Core Processor, mkin version 1.1.0
 0.810
 1.264
 1.5031.984
 2.847
 
    Linux, Intel(R) Core(TM) i7-4710MQ CPU @ 2.50GHz, mkin version 1.1.02.3483.5794.25411.3155.9818.368
    @@ -468,7 +507,7 @@

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    Site built with pkgdown 2.0.2.

    +

    Site built with pkgdown 2.0.3.

    -- cgit v1.2.1