From 5f9645570d8308f48a492d48f38acd0d08f7d636 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Fri, 23 Nov 2018 20:01:28 +0100 Subject: Static documentation rebuilt by pkgdown --- docs/articles/FOCUS_D.html | 10 +++---- docs/articles/FOCUS_L.html | 44 ++++++++++++++--------------- docs/articles/mkin.html | 2 +- docs/articles/twa.html | 2 +- docs/articles/web_only/FOCUS_Z.html | 2 +- docs/articles/web_only/compiled_models.html | 12 ++++---- 6 files changed, 36 insertions(+), 36 deletions(-) (limited to 'docs/articles') diff --git a/docs/articles/FOCUS_D.html b/docs/articles/FOCUS_D.html index b44462aa..b03e7612 100644 --- a/docs/articles/FOCUS_D.html +++ b/docs/articles/FOCUS_D.html @@ -84,7 +84,7 @@

Example evaluation of FOCUS Example Dataset D

Johannes Ranke

-

2018-09-18

+

2018-11-23

@@ -160,10 +160,10 @@

A comprehensive report of the results is obtained using the summary method for mkinfit objects.

summary(fit)
-
## mkin version used for fitting:    0.9.47.5 
+
## mkin version used for fitting:    0.9.47.6 
 ## R version used for fitting:       3.5.1 
-## Date of fit:     Fri Sep 14 17:17:43 2018 
-## Date of summary: Fri Sep 14 17:17:44 2018 
+## Date of fit:     Fri Nov 23 19:58:46 2018 
+## Date of summary: Fri Nov 23 19:58:47 2018 
 ## 
 ## Equations:
 ## d_parent/dt = - k_parent_sink * parent - k_parent_m1 * parent
@@ -171,7 +171,7 @@
 ## 
 ## Model predictions using solution type deSolve 
 ## 
-## Fitted with method Port using 153 model solutions performed in 0.645 s
+## Fitted with method Port using 153 model solutions performed in 0.736 s
 ## 
 ## Weighting: none
 ## 
diff --git a/docs/articles/FOCUS_L.html b/docs/articles/FOCUS_L.html
index ea49ae10..37b4306f 100644
--- a/docs/articles/FOCUS_L.html
+++ b/docs/articles/FOCUS_L.html
@@ -84,7 +84,7 @@
       
Example evaluation of FOCUS Laboratory Data L1 to L3

                         
Johannes Ranke

             
-            
2018-09-18

+            
2018-11-23

       
       
       
@@ -110,15 +110,15 @@
 summary(m.L1.SFO)

 
## mkin version used for fitting:    0.9.47.6 
 ## R version used for fitting:       3.5.1 
-## Date of fit:     Tue Sep 18 15:18:12 2018 
-## Date of summary: Tue Sep 18 15:18:12 2018 
+## Date of fit:     Fri Nov 23 19:58:49 2018 
+## Date of summary: Fri Nov 23 19:58:49 2018 
 ## 
 ## Equations:
 ## d_parent/dt = - k_parent_sink * parent
 ## 
 ## Model predictions using solution type analytical 
 ## 
-## Fitted with method Port using 37 model solutions performed in 0.084 s
+## Fitted with method Port using 37 model solutions performed in 0.095 s
 ## 
 ## Weighting: none
 ## 
@@ -201,15 +201,15 @@
 
 
## mkin version used for fitting:    0.9.47.6 
 ## R version used for fitting:       3.5.1 
-## Date of fit:     Tue Sep 18 15:18:14 2018 
-## Date of summary: Tue Sep 18 15:18:14 2018 
+## Date of fit:     Fri Nov 23 19:58:51 2018 
+## Date of summary: Fri Nov 23 19:58:51 2018 
 ## 
 ## Equations:
 ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
 ## 
 ## Model predictions using solution type analytical 
 ## 
-## Fitted with method Port using 611 model solutions performed in 1.321 s
+## Fitted with method Port using 611 model solutions performed in 1.464 s
 ## 
 ## Weighting: none
 ## 
@@ -296,15 +296,15 @@
 
 
## mkin version used for fitting:    0.9.47.6 
 ## R version used for fitting:       3.5.1 
-## Date of fit:     Tue Sep 18 15:18:14 2018 
-## Date of summary: Tue Sep 18 15:18:14 2018 
+## Date of fit:     Fri Nov 23 19:58:51 2018 
+## Date of summary: Fri Nov 23 19:58:51 2018 
 ## 
 ## Equations:
 ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
 ## 
 ## Model predictions using solution type analytical 
 ## 
-## Fitted with method Port using 81 model solutions performed in 0.169 s
+## Fitted with method Port using 81 model solutions performed in 0.191 s
 ## 
 ## Weighting: none
 ## 
@@ -367,8 +367,8 @@
 
 
## mkin version used for fitting:    0.9.47.6 
 ## R version used for fitting:       3.5.1 
-## Date of fit:     Tue Sep 18 15:18:15 2018 
-## Date of summary: Tue Sep 18 15:18:15 2018 
+## Date of fit:     Fri Nov 23 19:58:52 2018 
+## Date of summary: Fri Nov 23 19:58:52 2018 
 ## 
 ## Equations:
 ## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) *
@@ -377,7 +377,7 @@
 ## 
 ## Model predictions using solution type analytical 
 ## 
-## Fitted with method Port using 336 model solutions performed in 0.739 s
+## Fitted with method Port using 336 model solutions performed in 0.824 s
 ## 
 ## Weighting: none
 ## 
@@ -459,8 +459,8 @@
 
 
## mkin version used for fitting:    0.9.47.6 
 ## R version used for fitting:       3.5.1 
-## Date of fit:     Tue Sep 18 15:18:16 2018 
-## Date of summary: Tue Sep 18 15:18:16 2018 
+## Date of fit:     Fri Nov 23 19:58:53 2018 
+## Date of summary: Fri Nov 23 19:58:54 2018 
 ## 
 ## Equations:
 ## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) *
@@ -469,7 +469,7 @@
 ## 
 ## Model predictions using solution type analytical 
 ## 
-## Fitted with method Port using 137 model solutions performed in 0.301 s
+## Fitted with method Port using 137 model solutions performed in 0.344 s
 ## 
 ## Weighting: none
 ## 
@@ -560,15 +560,15 @@
 
 
## mkin version used for fitting:    0.9.47.6 
 ## R version used for fitting:       3.5.1 
-## Date of fit:     Tue Sep 18 15:18:17 2018 
-## Date of summary: Tue Sep 18 15:18:17 2018 
+## Date of fit:     Fri Nov 23 19:58:54 2018 
+## Date of summary: Fri Nov 23 19:58:54 2018 
 ## 
 ## Equations:
 ## d_parent/dt = - k_parent_sink * parent
 ## 
 ## Model predictions using solution type analytical 
 ## 
-## Fitted with method Port using 46 model solutions performed in 0.107 s
+## Fitted with method Port using 46 model solutions performed in 0.108 s
 ## 
 ## Weighting: none
 ## 
@@ -620,15 +620,15 @@
 
 
## mkin version used for fitting:    0.9.47.6 
 ## R version used for fitting:       3.5.1 
-## Date of fit:     Tue Sep 18 15:18:17 2018 
-## Date of summary: Tue Sep 18 15:18:17 2018 
+## Date of fit:     Fri Nov 23 19:58:54 2018 
+## Date of summary: Fri Nov 23 19:58:54 2018 
 ## 
 ## Equations:
 ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
 ## 
 ## Model predictions using solution type analytical 
 ## 
-## Fitted with method Port using 66 model solutions performed in 0.139 s
+## Fitted with method Port using 66 model solutions performed in 0.159 s
 ## 
 ## Weighting: none
 ## 
diff --git a/docs/articles/mkin.html b/docs/articles/mkin.html
index e483043b..4ead1062 100644
--- a/docs/articles/mkin.html
+++ b/docs/articles/mkin.html
@@ -84,7 +84,7 @@
       
Introduction to mkin

                         
Johannes Ranke

             
-            
2018-09-18

+            
2018-11-23

       
       
       
diff --git a/docs/articles/twa.html b/docs/articles/twa.html
index d9249f9d..8c053c10 100644
--- a/docs/articles/twa.html
+++ b/docs/articles/twa.html
@@ -84,7 +84,7 @@
       
Calculation of time weighted average concentrations with mkin

                         
Johannes Ranke

             
-            
2018-09-18

+            
2018-11-23

       
       
       
diff --git a/docs/articles/web_only/FOCUS_Z.html b/docs/articles/web_only/FOCUS_Z.html
index a3e743d1..5215e039 100644
--- a/docs/articles/web_only/FOCUS_Z.html
+++ b/docs/articles/web_only/FOCUS_Z.html
@@ -84,7 +84,7 @@
       
Example evaluation of FOCUS dataset Z

                         
Johannes Ranke

             
-            
2018-09-18

+            
2018-11-23

       
       
       
diff --git a/docs/articles/web_only/compiled_models.html b/docs/articles/web_only/compiled_models.html
index 684f28cb..85efff61 100644
--- a/docs/articles/web_only/compiled_models.html
+++ b/docs/articles/web_only/compiled_models.html
@@ -84,7 +84,7 @@
       
Performance benefit by using compiled model definitions in mkin

                         
Johannes Ranke

             
-            
2018-09-18

+            
2018-11-23

       
       
       
@@ -125,9 +125,9 @@
 }

 
## Lade nötiges Paket: rbenchmark

 
##                    test replications elapsed relative user.self sys.self
-## 3     deSolve, compiled            3   2.005    1.000     2.003        0
-## 1 deSolve, not compiled            3  15.480    7.721    15.474        0
-## 2      Eigenvalue based            3   2.460    1.227     2.459        0
+## 3     deSolve, compiled            3   2.284    1.000     2.282        0
+## 1 deSolve, not compiled            3  17.732    7.764    17.724        0
+## 2      Eigenvalue based            3   2.812    1.231     2.809        0
 ##   user.child sys.child
 ## 3          0         0
 ## 1          0         0
@@ -156,8 +156,8 @@
 }

 
## Successfully compiled differential equation model from auto-generated C code.

 
##                    test replications elapsed relative user.self sys.self
-## 2     deSolve, compiled            3   3.524     1.00     3.523    0.000
-## 1 deSolve, not compiled            3  33.021     9.37    33.001    0.004
+## 2     deSolve, compiled            3   4.029    1.000     4.026        0
+## 1 deSolve, not compiled            3  37.760    9.372    37.744        0
 ##   user.child sys.child
 ## 2          0         0
 ## 1          0         0

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