From c90fdefb4cd438ae71c613f676c2ff6631d0a7a3 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Mon, 25 Feb 2019 15:27:41 +0100 Subject: Static documentation rebuilt by current pkgdown --- docs/articles/FOCUS_D.html | 8 +++--- docs/articles/FOCUS_L.html | 42 ++++++++++++++--------------- docs/articles/index.html | 2 +- docs/articles/mkin.html | 2 +- docs/articles/twa.html | 2 +- docs/articles/web_only/FOCUS_Z.html | 2 +- docs/articles/web_only/compiled_models.html | 14 +++++----- 7 files changed, 36 insertions(+), 36 deletions(-) (limited to 'docs/articles') diff --git a/docs/articles/FOCUS_D.html b/docs/articles/FOCUS_D.html index a470cdb6..0875ce0f 100644 --- a/docs/articles/FOCUS_D.html +++ b/docs/articles/FOCUS_D.html @@ -163,8 +163,8 @@ 
summary(fit)
## mkin version used for fitting:    0.9.48.1 
 ## R version used for fitting:       3.5.2 
-## Date of fit:     Mon Feb 25 14:54:38 2019 
-## Date of summary: Mon Feb 25 14:54:38 2019 
+## Date of fit:     Mon Feb 25 15:25:02 2019 
+## Date of summary: Mon Feb 25 15:25:02 2019 
 ## 
 ## Equations:
 ## d_parent/dt = - k_parent_sink * parent - k_parent_m1 * parent
@@ -172,7 +172,7 @@
 ## 
 ## Model predictions using solution type deSolve 
 ## 
-## Fitted with method Port using 153 model solutions performed in 0.712 s
+## Fitted with method Port using 153 model solutions performed in 0.689 s
 ## 
 ## Weighting: none
 ## 
@@ -292,7 +292,7 @@
 
 
 

-  
Site built with pkgdown 1.3.0.

+  
Site built with pkgdown 1.3.0.9000.

 

       
 
diff --git a/docs/articles/FOCUS_L.html b/docs/articles/FOCUS_L.html
index e8a81075..14827789 100644
--- a/docs/articles/FOCUS_L.html
+++ b/docs/articles/FOCUS_L.html
@@ -111,8 +111,8 @@
 summary(m.L1.SFO)
## mkin version used for fitting:    0.9.48.1 
 ## R version used for fitting:       3.5.2 
-## Date of fit:     Mon Feb 25 14:54:40 2019 
-## Date of summary: Mon Feb 25 14:54:40 2019 
+## Date of fit:     Mon Feb 25 15:25:04 2019 
+## Date of summary: Mon Feb 25 15:25:04 2019 
 ## 
 ## Equations:
 ## d_parent/dt = - k_parent_sink * parent
@@ -202,15 +202,15 @@
 
summary(m.L1.FOMC, data = FALSE)

 
## mkin version used for fitting:    0.9.48.1 
 ## R version used for fitting:       3.5.2 
-## Date of fit:     Mon Feb 25 14:54:42 2019 
-## Date of summary: Mon Feb 25 14:54:42 2019 
+## Date of fit:     Mon Feb 25 15:25:06 2019 
+## Date of summary: Mon Feb 25 15:25:06 2019 
 ## 
 ## Equations:
 ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
 ## 
 ## Model predictions using solution type analytical 
 ## 
-## Fitted with method Port using 611 model solutions performed in 1.529 s
+## Fitted with method Port using 611 model solutions performed in 1.516 s
 ## 
 ## Weighting: none
 ## 
@@ -297,15 +297,15 @@
 
summary(m.L2.FOMC, data = FALSE)

 
## mkin version used for fitting:    0.9.48.1 
 ## R version used for fitting:       3.5.2 
-## Date of fit:     Mon Feb 25 14:54:42 2019 
-## Date of summary: Mon Feb 25 14:54:42 2019 
+## Date of fit:     Mon Feb 25 15:25:06 2019 
+## Date of summary: Mon Feb 25 15:25:06 2019 
 ## 
 ## Equations:
 ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
 ## 
 ## Model predictions using solution type analytical 
 ## 
-## Fitted with method Port using 81 model solutions performed in 0.199 s
+## Fitted with method Port using 81 model solutions performed in 0.198 s
 ## 
 ## Weighting: none
 ## 
@@ -368,8 +368,8 @@
 
summary(m.L2.DFOP, data = FALSE)

 
## mkin version used for fitting:    0.9.48.1 
 ## R version used for fitting:       3.5.2 
-## Date of fit:     Mon Feb 25 14:54:44 2019 
-## Date of summary: Mon Feb 25 14:54:44 2019 
+## Date of fit:     Mon Feb 25 15:25:07 2019 
+## Date of summary: Mon Feb 25 15:25:07 2019 
 ## 
 ## Equations:
 ## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) *
@@ -378,7 +378,7 @@
 ## 
 ## Model predictions using solution type analytical 
 ## 
-## Fitted with method Port using 336 model solutions performed in 0.853 s
+## Fitted with method Port using 336 model solutions performed in 0.85 s
 ## 
 ## Weighting: none
 ## 
@@ -460,8 +460,8 @@
 
summary(mm.L3[["DFOP", 1]])

 
## mkin version used for fitting:    0.9.48.1 
 ## R version used for fitting:       3.5.2 
-## Date of fit:     Mon Feb 25 14:54:45 2019 
-## Date of summary: Mon Feb 25 14:54:45 2019 
+## Date of fit:     Mon Feb 25 15:25:08 2019 
+## Date of summary: Mon Feb 25 15:25:09 2019 
 ## 
 ## Equations:
 ## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) *
@@ -470,7 +470,7 @@
 ## 
 ## Model predictions using solution type analytical 
 ## 
-## Fitted with method Port using 137 model solutions performed in 0.348 s
+## Fitted with method Port using 137 model solutions performed in 0.346 s
 ## 
 ## Weighting: none
 ## 
@@ -561,15 +561,15 @@
 
summary(mm.L4[["SFO", 1]], data = FALSE)

 
## mkin version used for fitting:    0.9.48.1 
 ## R version used for fitting:       3.5.2 
-## Date of fit:     Mon Feb 25 14:54:45 2019 
-## Date of summary: Mon Feb 25 14:54:45 2019 
+## Date of fit:     Mon Feb 25 15:25:09 2019 
+## Date of summary: Mon Feb 25 15:25:09 2019 
 ## 
 ## Equations:
 ## d_parent/dt = - k_parent_sink * parent
 ## 
 ## Model predictions using solution type analytical 
 ## 
-## Fitted with method Port using 46 model solutions performed in 0.112 s
+## Fitted with method Port using 46 model solutions performed in 0.111 s
 ## 
 ## Weighting: none
 ## 
@@ -621,15 +621,15 @@
 
summary(mm.L4[["FOMC", 1]], data = FALSE)

 
## mkin version used for fitting:    0.9.48.1 
 ## R version used for fitting:       3.5.2 
-## Date of fit:     Mon Feb 25 14:54:45 2019 
-## Date of summary: Mon Feb 25 14:54:45 2019 
+## Date of fit:     Mon Feb 25 15:25:09 2019 
+## Date of summary: Mon Feb 25 15:25:09 2019 
 ## 
 ## Equations:
 ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
 ## 
 ## Model predictions using solution type analytical 
 ## 
-## Fitted with method Port using 66 model solutions performed in 0.165 s
+## Fitted with method Port using 66 model solutions performed in 0.164 s
 ## 
 ## Weighting: none
 ## 
@@ -724,7 +724,7 @@
 
 
 

-  
Site built with pkgdown 1.3.0.

+  
Site built with pkgdown 1.3.0.9000.

 

       
 
diff --git a/docs/articles/index.html b/docs/articles/index.html
index b2b11a3f..a1c08835 100644
--- a/docs/articles/index.html
+++ b/docs/articles/index.html
@@ -140,7 +140,7 @@
 
 
 

-  
Site built with pkgdown 1.3.0.

+  
Site built with pkgdown 1.3.0.9000.

 

       
    
diff --git a/docs/articles/mkin.html b/docs/articles/mkin.html
index bffd19dd..24520f74 100644
--- a/docs/articles/mkin.html
+++ b/docs/articles/mkin.html
@@ -247,7 +247,7 @@
 
 
 

-  
Site built with pkgdown 1.3.0.

+  
Site built with pkgdown 1.3.0.9000.

 

       
 
diff --git a/docs/articles/twa.html b/docs/articles/twa.html
index 83b05989..bf56eff2 100644
--- a/docs/articles/twa.html
+++ b/docs/articles/twa.html
@@ -136,7 +136,7 @@
 
 
 

-  
Site built with pkgdown 1.3.0.

+  
Site built with pkgdown 1.3.0.9000.

 

       
 
diff --git a/docs/articles/web_only/FOCUS_Z.html b/docs/articles/web_only/FOCUS_Z.html
index c3ee7415..48f08bfc 100644
--- a/docs/articles/web_only/FOCUS_Z.html
+++ b/docs/articles/web_only/FOCUS_Z.html
@@ -321,7 +321,7 @@
 
 
 

-  
Site built with pkgdown 1.3.0.

+  
Site built with pkgdown 1.3.0.9000.

 

       
 
diff --git a/docs/articles/web_only/compiled_models.html b/docs/articles/web_only/compiled_models.html
index 4209d2bc..16f0cc7a 100644
--- a/docs/articles/web_only/compiled_models.html
+++ b/docs/articles/web_only/compiled_models.html
@@ -126,14 +126,14 @@
 }

 
## Lade nötiges Paket: rbenchmark

 
##                    test replications elapsed relative user.self sys.self
-## 3     deSolve, compiled            3   2.394    1.000     2.388    0.004
-## 1 deSolve, not compiled            3  17.923    7.487    17.910    0.000
-## 2      Eigenvalue based            3   3.021    1.262     3.018    0.000
+## 3     deSolve, compiled            3   2.328    1.000     2.327        0
+## 1 deSolve, not compiled            3  17.641    7.578    17.633        0
+## 2      Eigenvalue based            3   2.873    1.234     2.871        0
 ##   user.child sys.child
 ## 3          0         0
 ## 1          0         0
 ## 2          0         0

-
We see that using the compiled model is by a factor of around 7 faster than using the R version with the default ode solver, and it is even faster than the Eigenvalue based solution implemented in R which does not need iterative solution of the ODEs.

+
We see that using the compiled model is by a factor of around 8 faster than using the R version with the default ode solver, and it is even faster than the Eigenvalue based solution implemented in R which does not need iterative solution of the ODEs.

 
 

 

@@ -157,8 +157,8 @@
 }

 
## Successfully compiled differential equation model from auto-generated C code.

 
##                    test replications elapsed relative user.self sys.self
-## 2     deSolve, compiled            3   4.162    1.000     4.158        0
-## 1 deSolve, not compiled            3  37.536    9.019    37.517        0
+## 2     deSolve, compiled            3   4.126    1.000     4.125        0
+## 1 deSolve, not compiled            3  37.487    9.086    37.467        0
 ##   user.child sys.child
 ## 2          0         0
 ## 1          0         0

@@ -190,7 +190,7 @@
 
 
 

-  
Site built with pkgdown 1.3.0.

+  
Site built with pkgdown 1.3.0.9000.

 

       
 
-- 
cgit v1.2.1