From db9ae6a0c9cecb92048fde6f06af1da183c09b5f Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Thu, 19 Nov 2020 15:41:24 +0100 Subject: Depend on parallel, doc improvements By depending on parallel instead of importing it, functions to set up and stop a cluster are always available when mkin is loaded. The use of multicore processing in mmkin on Windows is now documented in the help file, which brings mkin closer to a version 1.0 #9. --- docs/dev/articles/mkin.html | 11 ++++++----- 1 file changed, 6 insertions(+), 5 deletions(-) (limited to 'docs/dev/articles/mkin.html') diff --git a/docs/dev/articles/mkin.html b/docs/dev/articles/mkin.html index 07627029..2482920b 100644 --- a/docs/dev/articles/mkin.html +++ b/docs/dev/articles/mkin.html @@ -95,13 +95,14 @@ -
+ +

Introduction to mkin

Johannes Ranke

-

2020-10-15

+

2020-11-19

Source: vignettes/mkin.rmd @@ -115,8 +116,8 @@

Abstract

In the regulatory evaluation of chemical substances like plant protection products (pesticides), biocides and other chemicals, degradation data play an important role. For the evaluation of pesticide degradation experiments, detailed guidance has been developed, based on nonlinear optimisation. The R add-on package mkin implements fitting some of the models recommended in this guidance from within R and calculates some statistical measures for data series within one or more compartments, for parent and metabolites.

-
-library("mkin", quietly = TRUE)
+
+library("mkin", quietly = TRUE)
 # Define the kinetic model
 m_SFO_SFO_SFO <- mkinmod(parent = mkinsub("SFO", "M1"),
                          M1 = mkinsub("SFO", "M2"),
@@ -143,7 +144,7 @@
 f_SFO_SFO_SFO <- mkinfit(m_SFO_SFO_SFO, d_SFO_SFO_SFO_err[[1]], quiet = TRUE)
 
 # Plot the results separately for parent and metabolites
-plot_sep(f_SFO_SFO_SFO, lpos = c("topright", "bottomright", "bottomright"))

+plot_sep(f_SFO_SFO_SFO, lpos = c("topright", "bottomright", "bottomright"))

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