From 34ec60f1b140d788880d84b70cb62b344f7d74b9 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Sun, 16 Apr 2023 13:42:23 +0200 Subject: Complete rebuild of static docs --- docs/dev/articles/prebuilt/2022_cyan_pathway.html | 76 +++++++++++------------ 1 file changed, 38 insertions(+), 38 deletions(-) (limited to 'docs/dev/articles/prebuilt/2022_cyan_pathway.html') diff --git a/docs/dev/articles/prebuilt/2022_cyan_pathway.html b/docs/dev/articles/prebuilt/2022_cyan_pathway.html index 1095dd28..875f5ac9 100644 --- a/docs/dev/articles/prebuilt/2022_cyan_pathway.html +++ b/docs/dev/articles/prebuilt/2022_cyan_pathway.html @@ -136,7 +136,7 @@ residue data on cyantraniliprole Ranke

Last change on 6 January -2023, last compiled on 17 Februar 2023

+2023, last compiled on 16 April 2023 Source: vignettes/prebuilt/2022_cyan_pathway.rmd @@ -2206,7 +2206,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 10:07:38 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:20 2023 Equations: d_cyan/dt = - k_cyan * cyan @@ -2334,7 +2334,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 10:08:17 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:20 2023 Equations: d_cyan/dt = - k_cyan * cyan @@ -2464,7 +2464,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 10:09:12 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:20 2023 Equations: d_cyan/dt = - (alpha/beta) * 1/((time/beta) + 1) * cyan @@ -2609,7 +2609,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 10:09:18 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:20 2023 Equations: d_cyan/dt = - (alpha/beta) * 1/((time/beta) + 1) * cyan @@ -2747,7 +2747,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 10:10:30 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:20 2023 Equations: d_cyan/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 * @@ -2893,7 +2893,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 10:16:28 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:20 2023 Equations: d_cyan/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 * @@ -3039,7 +3039,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 10:10:49 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:20 2023 Equations: d_cyan_free/dt = - k_cyan_free * cyan_free - k_cyan_free_bound * @@ -3204,7 +3204,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 10:17:00 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:20 2023 Equations: d_cyan_free/dt = - k_cyan_free * cyan_free - k_cyan_free_bound * @@ -3369,7 +3369,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 10:11:04 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:20 2023 Equations: d_cyan/dt = - ifelse(time <= tb, k1, k2) * cyan @@ -3511,7 +3511,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 10:11:24 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:20 2023 Equations: d_cyan/dt = - ifelse(time <= tb, k1, k2) * cyan @@ -3659,7 +3659,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 10:34:28 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:20 2023 Equations: d_cyan/dt = - (alpha/beta) * 1/((time/beta) + 1) * cyan @@ -3823,7 +3823,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 10:37:36 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:20 2023 Equations: d_cyan/dt = - (alpha/beta) * 1/((time/beta) + 1) * cyan @@ -3969,7 +3969,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 10:38:34 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:20 2023 Equations: d_cyan/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 * @@ -4160,7 +4160,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 10:45:32 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:20 2023 Equations: d_cyan/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 * @@ -4351,7 +4351,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 10:38:37 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:20 2023 Equations: d_cyan_free/dt = - k_cyan_free * cyan_free - k_cyan_free_bound * @@ -4547,7 +4547,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 10:46:02 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:20 2023 Equations: d_cyan_free/dt = - k_cyan_free * cyan_free - k_cyan_free_bound * @@ -4748,7 +4748,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 11:18:41 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:21 2023 Equations: d_cyan/dt = - (alpha/beta) * 1/((time/beta) + 1) * cyan @@ -4891,7 +4891,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 11:16:32 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:21 2023 Equations: d_cyan/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 * @@ -5057,7 +5057,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 11:22:28 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:21 2023 Equations: d_cyan/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 * @@ -5223,7 +5223,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 11:17:37 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:21 2023 Equations: d_cyan_free/dt = - k_cyan_free * cyan_free - k_cyan_free_bound * @@ -5394,7 +5394,7 @@ saemix version used for fitting: 3.2 mkin version used for pre-fitting: 1.2.2 R version used for fitting: 4.2.2 Date of fit: Sat Jan 28 11:21:01 2023 -Date of summary: Fri Feb 17 22:24:33 2023 +Date of summary: Sun Apr 16 08:35:21 2023 Equations: d_cyan_free/dt = - k_cyan_free * cyan_free - k_cyan_free_bound * @@ -5561,9 +5561,9 @@ JSE76 26.89 89.33 NA NA NA

Session info

-
R version 4.2.2 Patched (2022-11-10 r83330)
+
R version 4.2.3 (2023-03-15)
 Platform: x86_64-pc-linux-gnu (64-bit)
-Running under: Debian GNU/Linux bookworm/sid
+Running under: Debian GNU/Linux 12 (bookworm)
 
 Matrix products: default
 BLAS:   /usr/lib/x86_64-linux-gnu/openblas-serial/libblas.so.3
@@ -5582,23 +5582,23 @@ attached base packages:
 [8] base     
 
 other attached packages:
-[1] saemix_3.2 npde_3.3   knitr_1.41 mkin_1.2.3
+[1] saemix_3.2 npde_3.3   knitr_1.42 mkin_1.2.3
 
 loaded via a namespace (and not attached):
- [1] pillar_1.8.1      bslib_0.4.2       compiler_4.2.2    jquerylib_0.1.4  
- [5] tools_4.2.2       mclust_6.0.0      digest_0.6.31     tibble_3.1.8     
- [9] jsonlite_1.8.4    evaluate_0.19     memoise_2.0.1     lifecycle_1.0.3  
-[13] nlme_3.1-162      gtable_0.3.1      lattice_0.20-45   pkgconfig_2.0.3  
-[17] rlang_1.0.6       DBI_1.1.3         cli_3.5.0         yaml_2.3.6       
-[21] pkgdown_2.0.7     xfun_0.35         fastmap_1.1.0     gridExtra_2.3    
-[25] dplyr_1.0.10      stringr_1.5.0     generics_0.1.3    desc_1.4.2       
-[29] fs_1.5.2          vctrs_0.5.1       sass_0.4.4        systemfonts_1.0.4
-[33] tidyselect_1.2.0  rprojroot_2.0.3   lmtest_0.9-40     grid_4.2.2       
+ [1] pillar_1.9.0      bslib_0.4.2       compiler_4.2.3    jquerylib_0.1.4  
+ [5] tools_4.2.3       mclust_6.0.0      digest_0.6.31     tibble_3.2.1     
+ [9] jsonlite_1.8.4    evaluate_0.20     memoise_2.0.1     lifecycle_1.0.3  
+[13] nlme_3.1-162      gtable_0.3.3      lattice_0.21-8    pkgconfig_2.0.3  
+[17] rlang_1.1.0       DBI_1.1.3         cli_3.6.1         yaml_2.3.7       
+[21] pkgdown_2.0.7     xfun_0.38         fastmap_1.1.1     gridExtra_2.3    
+[25] dplyr_1.1.1       stringr_1.5.0     generics_0.1.3    desc_1.4.2       
+[29] fs_1.6.1          vctrs_0.6.1       sass_0.4.5        systemfonts_1.0.4
+[33] tidyselect_1.2.0  rprojroot_2.0.3   lmtest_0.9-40     grid_4.2.3       
 [37] inline_0.3.19     glue_1.6.2        R6_2.5.1          textshaping_0.3.6
-[41] fansi_1.0.3       rmarkdown_2.19    purrr_1.0.0       ggplot2_3.4.0    
-[45] magrittr_2.0.3    scales_1.2.1      htmltools_0.5.4   assertthat_0.2.1 
-[49] colorspace_2.0-3  ragg_1.2.4        utf8_1.2.2        stringi_1.7.8    
-[53] munsell_0.5.0     cachem_1.0.6      zoo_1.8-11       

+[41] fansi_1.0.4       rmarkdown_2.21    purrr_1.0.1       ggplot2_3.4.2    
+[45] magrittr_2.0.3    scales_1.2.1      htmltools_0.5.5   colorspace_2.1-0 
+[49] ragg_1.2.5        utf8_1.2.3        stringi_1.7.12    munsell_0.5.0    
+[53] cachem_1.0.7      zoo_1.8-12

Hardware info -- cgit v1.2.1