From a01fe8923ff50dcc76c34fb09ad500f5f5433063 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Fri, 19 May 2023 22:35:52 +0200 Subject: Release date, update pkgdown development docs --- docs/dev/articles/web_only/compiled_models.html | 20 ++++++++++---------- 1 file changed, 10 insertions(+), 10 deletions(-) (limited to 'docs/dev/articles/web_only/compiled_models.html') diff --git a/docs/dev/articles/web_only/compiled_models.html b/docs/dev/articles/web_only/compiled_models.html index e7905860..a0b34dda 100644 --- a/docs/dev/articles/web_only/compiled_models.html +++ b/docs/dev/articles/web_only/compiled_models.html @@ -34,7 +34,7 @@ mkin - 1.2.3 + 1.2.5 @@ -135,7 +135,7 @@ definitions in mkin

Johannes Ranke

-

2023-04-16

+

2023-05-19

Source: vignettes/web_only/compiled_models.rmd @@ -214,10 +214,10 @@ solution is also implemented, which is included in the tests below.

print("R package rbenchmark is not available") } 
##                    test replications relative elapsed
-## 4            analytical            1    1.000   0.105
-## 3     deSolve, compiled            1    1.276   0.134
-## 2      Eigenvalue based            1    1.762   0.185
-## 1 deSolve, not compiled            1   21.914   2.301
+## 4 analytical 1 1.000 0.108 +## 3 deSolve, compiled 1 1.259 0.136 +## 2 Eigenvalue based 1 1.704 0.184 +## 1 deSolve, not compiled 1 21.574 2.330

We see that using the compiled model is by more than a factor of 10 faster than using deSolve without compiled code.

@@ -248,12 +248,12 @@ compiled code is available.

} 
## Temporary DLL for differentials generated and loaded
##                    test replications relative elapsed
-## 2     deSolve, compiled            1    1.000   0.176
-## 1 deSolve, not compiled            1   23.938   4.213
+## 2 deSolve, compiled 1 1.000 0.178 +## 1 deSolve, not compiled 1 23.708 4.220

Here we get a performance benefit of a factor of 24 using the version of the differential equation model compiled from C code!

-

This vignette was built with mkin 1.2.3 on

-
## R version 4.2.3 (2023-03-15)
+
This vignette was built with mkin 1.2.5 on

+
## R version 4.3.0 (2023-04-21)
 ## Platform: x86_64-pc-linux-gnu (64-bit)
 ## Running under: Debian GNU/Linux 12 (bookworm)

 
## CPU model: AMD Ryzen 9 7950X 16-Core Processor

-- 
cgit v1.2.1