From bc3825ae2d12c18ea3d3caf17eb23c93fef180b8 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Thu, 8 Oct 2020 09:31:35 +0200 Subject: Fix issues for release --- docs/dev/index.html | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) (limited to 'docs/dev/index.html') diff --git a/docs/dev/index.html b/docs/dev/index.html index 37cd7d50..12df433a 100644 --- a/docs/dev/index.html +++ b/docs/dev/index.html @@ -127,7 +127,7 @@

Documentation

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The HTML documentation of the latest version released to CRAN is available at jrwb.de and github. Documentation of the development version is found in the ‘dev’ subdirectory.

+

The HTML documentation of the latest version released to CRAN is available at jrwb.de and github. Documentation of the development version is found in the ‘dev’ subdirectory.

@@ -152,7 +152,7 @@

GUI

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There is a graphical user interface that may be useful. Please refer to its documentation page for installation instructions and a manual.

+

There is a graphical user interface that may be useful. Please refer to its documentation page for installation instructions and a manual.

@@ -166,10 +166,10 @@

mkin could not have been written without me being introduced to regulatory fate modelling of pesticides by Adrian Gurney during my time at Harlan Laboratories Ltd (formerly RCC Ltd). mkin greatly profits from and largely follows the work done by the FOCUS Degradation Kinetics Workgroup, as detailed in their guidance document from 2006, slightly updated in 2011 and in 2014.

Also, it was inspired by the first version of KinGUI developed by BayerCropScience, which is based on the MatLab runtime environment.

The companion package kinfit (now deprecated) was started in 2008 and first published on CRAN on 01 May 2010.

-

The first mkin code was published on 11 May 2010 and the first CRAN version on 18 May 2010.

+

The first mkin code was published on 11 May 2010 and the first CRAN version on 18 May 2010.

In 2011, Bayer Crop Science started to distribute an R based successor to KinGUI named KinGUII whose R code is based on mkin, but which added, among other refinements, a closed source graphical user interface (GUI), iteratively reweighted least squares (IRLS) optimisation of the variance for each of the observed variables, and Markov Chain Monte Carlo (MCMC) simulation functionality, similar to what is available e.g. in the FME package.

Somewhat in parallel, Syngenta has sponsored the development of an mkin and KinGUII based GUI application called CAKE, which also adds IRLS and MCMC, is more limited in the model formulation, but puts more weight on usability. CAKE is available for download from the CAKE website, where you can also find a zip archive of the R scripts derived from mkin, published under the GPL license.

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Finally, there is KineticEval, which contains a further development of the scripts used for KinGUII, so the different tools will hopefully be able to learn from each other in the future as well.

+

Finally, there is KineticEval, which contains a further development of the scripts used for KinGUII, so the different tools will hopefully be able to learn from each other in the future as well.

@@ -203,7 +203,7 @@ Ranke J, Wöltjen J, Meinecke S (2018) Comparison of software tools for kinetic
  • Browse source code at
    http://​github.com/​jranke/​mkin/​
    • -
  • Report a bug at
    http://​github.com/​jranke/​mkin/​issues +
  • Report a bug at
    http://​github.com/​jranke/​mkin/​issues/​

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