From 004fce2520d6889d82226e21bc443426e81d93f2 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Mon, 17 Apr 2023 19:39:09 +0200 Subject: Improve docs of multistart method --- docs/dev/news/index.html | 56 +++++++++++++++--------------------------------- 1 file changed, 17 insertions(+), 39 deletions(-) (limited to 'docs/dev/news/index.html') diff --git a/docs/dev/news/index.html b/docs/dev/news/index.html index 2c169609..70eeeed6 100644 --- a/docs/dev/news/index.html +++ b/docs/dev/news/index.html @@ -81,11 +81,6 @@
  • Example evaluation of NAFTA SOP Attachment examples
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  • Code coverage report
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  • - -
  • News @@ -176,8 +171,7 @@

    mkin 1.0.5 (2021-09-15)

    -
    • ‘dimethenamid_2018’: Correct the data for the Borstel soil. The five observations from Staudenmaier (2013) that were previously stored as “Borstel 2” are actually just a subset of the 16 observations in “Borstel 1” which is now simply “Borstel”
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    +

    mkin 1.0.4 (2021-04-20)

    • All plotting functions setting graphical parameters: Use on.exit() for resetting graphical parameters

      • @@ -186,12 +180,10 @@

    mkin 1.0.3 (2021-02-15)

    -
    • Review and update README, the ‘Introduction to mkin’ vignette and some of the help pages
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    +

    mkin 1.0.2 (Unreleased)

    -
    • ‘mkinfit’: Keep model names stored in ‘mkinmod’ objects, avoiding their loss in ‘gmkin’
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    +

    mkin 1.0.1 (2021-02-10)

    • ‘confint.mmkin’, ‘nlme.mmkin’, ‘transform_odeparms’: Fix example code in dontrun sections that failed with current defaults

      • @@ -246,8 +238,7 @@

    mkin 0.9.49.11 (2020-04-20)

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    • Increase a test tolerance to make it pass on all CRAN check machines
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    +

    mkin 0.9.49.10 (2020-04-18)

    • ‘nlme.mmkin’: An nlme method for mmkin row objects and an associated S3 class with print, plot, anova and endpoint methods

      • @@ -362,8 +353,7 @@

    mkin 0.9.46 (2017-07-24)

    -
    • Remove test_FOMC_ill-defined.R as it is too platform dependent
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    +

    mkin 0.9.45.2 (2017-07-24)

    • Rename twa to max_twa_parent to avoid conflict with twa from my pfm package

      • @@ -375,8 +365,7 @@

      mkin 0.9.45.1 (2016-12-20)

      New features

      -
      • A twa function, calculating maximum time weighted average concentrations for the parent (SFO, FOMC and DFOP).
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      +
      • A twa function, calculating maximum time weighted average concentrations for the parent (SFO, FOMC and DFOP).

    mkin 0.9.45 (2016-12-08)

    @@ -391,8 +380,7 @@

    mkin 0.9.44 (2016-06-29)

    Bug fixes

    -
    • The test test_FOMC_ill-defined failed on several architectures, so the test is now skipped
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    +
    • The test test_FOMC_ill-defined failed on several architectures, so the test is now skipped

    mkin 0.9.43 (2016-06-28)

    @@ -426,8 +414,7 @@

    mkin 0.9.42 (2016-03-25)

    Major changes

    -
    • Add the argument from_max_mean to mkinfit, for fitting only the decline from the maximum observed value for models with a single observed variable
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    +
    • Add the argument from_max_mean to mkinfit, for fitting only the decline from the maximum observed value for models with a single observed variable

    Minor changes

    • Add plots to compiled_models vignette

      • @@ -447,21 +434,18 @@

      Bug fixes

      • -print.summary.mkinfit(): Avoid an error that occurred when printing summaries generated with mkin versions before 0.9-36
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      +print.summary.mkinfit(): Avoid an error that occurred when printing summaries generated with mkin versions before 0.9-36

    mkin 0.9-40 (2015-07-21)

    Bug fixes

    • -endpoints(): For DFOP and SFORB models, where optimize() is used, make use of the fact that the DT50 must be between DT50_k1 and DT50_k2 (DFOP) or DT50_b1 and DT50_b2 (SFORB), as optimize() sometimes did not find the minimum. Likewise for finding DT90 values. Also fit on the log scale to make the function more efficient.
      • -
    +endpoints(): For DFOP and SFORB models, where optimize() is used, make use of the fact that the DT50 must be between DT50_k1 and DT50_k2 (DFOP) or DT50_b1 and DT50_b2 (SFORB), as optimize() sometimes did not find the minimum. Likewise for finding DT90 values. Also fit on the log scale to make the function more efficient.

    • Internal changes

    +DESCRIPTION, NAMESPACE, R/*.R: Import (from) stats, graphics and methods packages, and qualify some function calls for non-base packages installed with R to avoid NOTES made by R CMD check –as-cran with upcoming R versions.

    mkin 0.9-39 (2015-06-26)

    @@ -473,8 +457,7 @@

    Bug fixes

    • -mkinparplot(): Fix the x axis scaling for rate constants and formation fractions that got confused by the introduction of the t-values of transformed parameters.
      • -
    +mkinparplot(): Fix the x axis scaling for rate constants and formation fractions that got confused by the introduction of the t-values of transformed parameters.

    mkin 0.9-38 (2015-06-24)

    @@ -486,8 +469,7 @@

    Bug fixes

    • -mkinmod(): When generating the C code for the derivatives, only declare the time variable when it is needed and remove the ‘-W-no-unused-variable’ compiler flag as the C compiler used in the CRAN checks on Solaris does not know it.
      • -
    +mkinmod(): When generating the C code for the derivatives, only declare the time variable when it is needed and remove the ‘-W-no-unused-variable’ compiler flag as the C compiler used in the CRAN checks on Solaris does not know it.

    mkin 0.9-36 (2015-06-21)

    @@ -500,15 +482,13 @@

    Minor changes

    -
    +

    mkin 0.9-35 (2015-05-15)

    Major changes

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    • Switch from RUnit to testthat for testing
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    +

    Bug fixes

    mkin 0.9-30 (2014-07-11)

    New features

    -
    • It is now possible to use formation fractions in combination with turning off the sink in mkinmod().
      • -
    +

    Major changes