From 6178249bbb5e9de7cb7f34287ee7de28a68fed6c Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Wed, 10 Aug 2022 15:38:17 +0200 Subject: Change dev branch used for docs, update static docs --- docs/dev/reference/endpoints.html | 40 ++++++++++++++++++++++----------------- 1 file changed, 23 insertions(+), 17 deletions(-) (limited to 'docs/dev/reference/endpoints.html') diff --git a/docs/dev/reference/endpoints.html b/docs/dev/reference/endpoints.html index a472b054..ed72ec47 100644 --- a/docs/dev/reference/endpoints.html +++ b/docs/dev/reference/endpoints.html @@ -23,7 +23,7 @@ advantage that the SFORB model can also be used for metabolites."> mkin - 1.1.0 + 1.1.2 @@ -32,7 +32,7 @@ advantage that the SFORB model can also be used for metabolites.">Functions and data
  • -
    • +
  • + Example evaluations of dimethenamid data from 2018 with nonlinear mixed-effects models +
  • Example evaluation of FOCUS Example Dataset Z
    • @@ -95,21 +98,24 @@ advantage that the SFORB model can also be used for metabolites.

    - 
    endpoints(fit)
    + 
    endpoints(fit)

    Arguments

    fit
    -

    An object of class mkinfit, nlme.mmkin, saem.mmkin or -nlmixr.mmkin. Or another object that has list components +

    An object of class mkinfit, nlme.mmkin or saem.mmkin, +or another object that has list components mkinmod containing an mkinmod degradation model, and two numeric vectors, bparms.optim and bparms.fixed, that contain parameter values for that model.

    +

    Value

    -

    A list with a matrix of dissipation times named distimes, + + +

    A list with a matrix of dissipation times named distimes, and, if applicable, a vector of formation fractions named ff and, if the SFORB model was in use, a vector of eigenvalues of these SFORB models, equivalent to DFOP rate constants

    @@ -131,22 +137,22 @@ HS and DFOP, as well as from Eigenvalues b1 and b2 of any SFORB models

    Examples

    - 
    
-  fit <- mkinfit("FOMC", FOCUS_2006_C, quiet = TRUE)
-  endpoints(fit)
+    
    
+  fit <- mkinfit("FOMC", FOCUS_2006_C, quiet = TRUE)
+  endpoints(fit)
 #> $distimes
 #>            DT50    DT90 DT50back
 #> parent 1.785233 15.1479 4.559973
 #> 
-  # \dontrun{
-    fit_2 <- mkinfit("DFOP", FOCUS_2006_C, quiet = TRUE)
-    endpoints(fit_2)
+  # \dontrun{
+    fit_2 <- mkinfit("DFOP", FOCUS_2006_C, quiet = TRUE)
+    endpoints(fit_2)
 #> $distimes
 #>            DT50     DT90 DT50back  DT50_k1  DT50_k2
 #> parent 1.886925 21.25106 6.397207 1.508293 38.83438
 #> 
-    fit_3 <- mkinfit("SFORB", FOCUS_2006_C, quiet = TRUE)
-    endpoints(fit_3)
+    fit_3 <- mkinfit("SFORB", FOCUS_2006_C, quiet = TRUE)
+    endpoints(fit_3)
 #> $ff
 #> parent_free 
 #>           1 
@@ -159,8 +165,8 @@ HS and DFOP, as well as from Eigenvalues b1 and b2 of any SFORB models
    
 #>            DT50     DT90 DT50back DT50_parent_b1 DT50_parent_b2
 #> parent 1.886925 21.25106 6.397208       1.508293       38.83438
 #> 
-  # }
-
+  # }
+
    @@ -175,7 +181,7 @@ HS and DFOP, as well as from Eigenvalues b1 and b2 of any SFORB models

    -

    Site built with pkgdown 2.0.2.

    +

    Site built with pkgdown 2.0.6.

    -- cgit v1.2.1