From f26d5082604402de3604e494e30fe5a2f030aca3 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Wed, 27 May 2020 07:57:10 +0200 Subject: Change dev version label to info color instead of the orange danger color. --- docs/dev/reference/mkinfit.html | 28 ++++++++++++++-------------- 1 file changed, 14 insertions(+), 14 deletions(-) (limited to 'docs/dev/reference/mkinfit.html') diff --git a/docs/dev/reference/mkinfit.html b/docs/dev/reference/mkinfit.html index 49e896fc..e1e75767 100644 --- a/docs/dev/reference/mkinfit.html +++ b/docs/dev/reference/mkinfit.html @@ -80,7 +80,7 @@ likelihood function." /> mkin - 0.9.50.3 + 0.9.50.3 @@ -424,15 +424,15 @@ Degradation Data. Environments 6(12) 124 fit <- mkinfit("FOMC", FOCUS_2006_C, quiet = TRUE) summary(fit)
#> mkin version used for fitting: 0.9.50.3 #> R version used for fitting: 4.0.0 -#> Date of fit: Wed May 27 05:54:13 2020 -#> Date of summary: Wed May 27 05:54:13 2020 +#> Date of fit: Wed May 27 07:43:45 2020 +#> Date of summary: Wed May 27 07:43:45 2020 #> #> Equations: #> d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent #> #> Model predictions using solution type analytical #> -#> Fitted using 222 model solutions performed in 0.043 s +#> Fitted using 222 model solutions performed in 0.044 s #> #> Error model: Constant variance #> @@ -509,7 +509,7 @@ Degradation Data. Environments 6(12) 124 m1 = mkinsub("SFO"))
#> Successfully compiled differential equation model from auto-generated C code.
# Fit the model to the FOCUS example dataset D using defaults print(system.time(fit <- mkinfit(SFO_SFO, FOCUS_2006_D, solution_type = "eigen", quiet = TRUE)))
#> Warning: Observations with value of zero were removed from the data
#> user system elapsed -#> 0.414 0.000 0.418
parms(fit)
#> parent_0 k_parent k_m1 f_parent_to_m1 sigma +#> 0.405 0.001 0.407
parms(fit)
#> parent_0 k_parent k_m1 f_parent_to_m1 sigma #> 99.598481046 0.098697740 0.005260651 0.514475962 3.125503875
endpoints(fit)
#> $ff #> parent_m1 parent_sink #> 0.514476 0.485524 @@ -599,7 +599,7 @@ Degradation Data. Environments 6(12) 124 #> Sum of squared residuals at call 165: 371.2134 #> Sum of squared residuals at call 167: 371.2134 #> Negative log-likelihood at call 177: 97.22429
#> Optimisation successfully terminated.
#> user system elapsed -#> 0.371 0.001 0.370
parms(fit.deSolve)
#> parent_0 k_parent k_m1 f_parent_to_m1 sigma +#> 0.361 0.000 0.361
parms(fit.deSolve)
#> parent_0 k_parent k_m1 f_parent_to_m1 sigma #> 99.598480300 0.098697739 0.005260651 0.514475968 3.125503874
endpoints(fit.deSolve)
#> $ff #> parent_m1 parent_sink #> 0.514476 0.485524 @@ -633,8 +633,8 @@ Degradation Data. Environments 6(12) 124 SFO_SFO.ff <- mkinmod(parent = mkinsub("SFO", "m1"), m1 = mkinsub("SFO"), use_of_ff = "max")
#> Successfully compiled differential equation model from auto-generated C code.
f.noweight <- mkinfit(SFO_SFO.ff, FOCUS_2006_D, quiet = TRUE)
#> Warning: Observations with value of zero were removed from the data
summary(f.noweight)
#> mkin version used for fitting: 0.9.50.3 #> R version used for fitting: 4.0.0 -#> Date of fit: Wed May 27 05:54:19 2020 -#> Date of summary: Wed May 27 05:54:19 2020 +#> Date of fit: Wed May 27 07:43:50 2020 +#> Date of summary: Wed May 27 07:43:50 2020 #> #> Equations: #> d_parent/dt = - k_parent * parent @@ -642,7 +642,7 @@ Degradation Data. Environments 6(12) 124 #> #> Model predictions using solution type analytical #> -#> Fitted using 421 model solutions performed in 0.126 s +#> Fitted using 421 model solutions performed in 0.125 s #> #> Error model: Constant variance #> @@ -755,8 +755,8 @@ Degradation Data. Environments 6(12) 124 #> 120 m1 25.15 28.78984 -3.640e+00 #> 120 m1 33.31 28.78984 4.520e+00
f.obs <- mkinfit(SFO_SFO.ff, FOCUS_2006_D, error_model = "obs", quiet = TRUE)
#> Warning: Observations with value of zero were removed from the data
summary(f.obs)
#> mkin version used for fitting: 0.9.50.3 #> R version used for fitting: 4.0.0 -#> Date of fit: Wed May 27 05:54:19 2020 -#> Date of summary: Wed May 27 05:54:19 2020 +#> Date of fit: Wed May 27 07:43:51 2020 +#> Date of summary: Wed May 27 07:43:51 2020 #> #> Equations: #> d_parent/dt = - k_parent * parent @@ -764,7 +764,7 @@ Degradation Data. Environments 6(12) 124 #> #> Model predictions using solution type analytical #> -#> Fitted using 978 model solutions performed in 0.33 s +#> Fitted using 978 model solutions performed in 0.413 s #> #> Error model: Variance unique to each observed variable #> @@ -892,8 +892,8 @@ Degradation Data. Environments 6(12) 124 #> 120 m1 25.15 28.80429 -3.654e+00 #> 120 m1 33.31 28.80429 4.506e+00
f.tc <- mkinfit(SFO_SFO.ff, FOCUS_2006_D, error_model = "tc", quiet = TRUE)
#> Warning: Observations with value of zero were removed from the data
summary(f.tc)
#> mkin version used for fitting: 0.9.50.3 #> R version used for fitting: 4.0.0 -#> Date of fit: Wed May 27 05:54:20 2020 -#> Date of summary: Wed May 27 05:54:20 2020 +#> Date of fit: Wed May 27 07:43:52 2020 +#> Date of summary: Wed May 27 07:43:52 2020 #> #> Equations: #> d_parent/dt = - k_parent * parent -- cgit v1.2.1