From b9be19af5e3085216d0cd5af439332f631fa8b92 Mon Sep 17 00:00:00 2001
From: Johannes Ranke
Date: Mon, 15 Feb 2021 17:36:12 +0100
Subject: Fully rebuild docs, rerun tests and check
---
docs/dev/reference/nlme.html | 28 ++++++++++++++--------------
1 file changed, 14 insertions(+), 14 deletions(-)
(limited to 'docs/dev/reference/nlme.html')
diff --git a/docs/dev/reference/nlme.html b/docs/dev/reference/nlme.html
index b3e88428..b850eb3d 100644
--- a/docs/dev/reference/nlme.html
+++ b/docs/dev/reference/nlme.html
@@ -75,7 +75,7 @@ datasets. They are used internally by the nlme.mmkin() method." />
mkin
- 0.9.50.4
+ 1.0.3.9000
@@ -124,7 +124,7 @@ datasets. They are used internally by the nlme.mmkin() method." />
-
-
+
@@ -224,37 +224,37 @@ nlme for the case of a single grouping variable ds.
summary(m_nlme)
#> Nonlinear mixed-effects model fit by maximum likelihood
#> Model: value ~ nlme_f(name, time, parent_0, log_k_parent_sink)
-#> Data: grouped_data
+#> Data: grouped_data
#> AIC BIC logLik
-#> 252.7798 262.1358 -121.3899
+#> 300.6824 310.2426 -145.3412
#>
#> Random effects:
#> Formula: list(parent_0 ~ 1, log_k_parent_sink ~ 1)
#> Level: ds
#> Structure: Diagonal
-#> parent_0 log_k_parent_sink Residual
-#> StdDev: 0.0006768135 0.6800777 2.489397
+#> parent_0 log_k_parent_sink Residual
+#> StdDev: 1.697361 0.6801209 3.666073
#>
-#> Fixed effects: parent_0 + log_k_parent_sink ~ 1
-#> Value Std.Error DF t-value p-value
-#> parent_0 101.74884 0.6456014 44 157.60321 0
-#> log_k_parent_sink -3.05575 0.4015811 44 -7.60929 0
+#> Fixed effects: parent_0 + log_k_parent_sink ~ 1
+#> Value Std.Error DF t-value p-value
+#> parent_0 100.99378 1.3890416 46 72.70753 0
+#> log_k_parent_sink -3.07521 0.4018589 46 -7.65246 0
#> Correlation:
#> prnt_0
-#> log_k_parent_sink 0.026
+#> log_k_parent_sink 0.027
#>
#> Standardized Within-Group Residuals:
#> Min Q1 Med Q3 Max
-#> -2.1317488 -0.6878121 0.0828385 0.8592270 2.9529864
+#> -1.9942823 -0.5622565 0.1791579 0.7165038 2.0704781
#>
-#> Number of Observations: 48
+#> Number of Observations: 50
#> Number of Groups: 3
#> Warning: Iteration 1, LME step: nlminb() did not converge (code = 1). Do increase 'msMaxIter'!