From 6476f5f49b373cd4cf05f2e73389df83e437d597 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Thu, 13 Feb 2025 16:30:31 +0100 Subject: Axis legend formatting, update vignettes --- docs/dev/reference/parhist.html | 169 ---------------------------------------- 1 file changed, 169 deletions(-) delete mode 100644 docs/dev/reference/parhist.html (limited to 'docs/dev/reference/parhist.html') diff --git a/docs/dev/reference/parhist.html b/docs/dev/reference/parhist.html deleted file mode 100644 index 27fc116f..00000000 --- a/docs/dev/reference/parhist.html +++ /dev/null @@ -1,169 +0,0 @@ - -Plot parameter distributions from multistart objects — parhist • mkin - - -
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Plot parameter distributions from multistart objects

- Source: R/parhist.R - -
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Produces a boxplot with all parameters from the multiple runs, scaled -either by the parameters of the run with the highest likelihood, -or by their medians as proposed in the paper by Duchesne et al. (2021).

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- -
- 
parhist(
-  object,
-  llmin = -Inf,
-  scale = c("best", "median"),
-  lpos = "bottomleft",
-  main = "",
-  ...
-)
-
- -
-

Arguments

-
object
-

The multistart object

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llmin
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The minimum likelihood of objects to be shown

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scale
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By default, scale parameters using the best available fit. -If 'median', parameters are scaled using the median parameters from all fits.

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lpos
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Positioning of the legend.

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main
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Title of the plot

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...
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Passed to boxplot

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References

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Duchesne R, Guillemin A, Gandrillon O, Crauste F. Practical -identifiability in the frame of nonlinear mixed effects models: the example -of the in vitro erythropoiesis. BMC Bioinformatics. 2021 Oct 4;22(1):478. -doi: 10.1186/s12859-021-04373-4.

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See also

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multistart

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- - - - - - - - -- cgit v1.2.1