From 2a521ab0a4b7d981a2042353e2c60b8a877489b8 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Fri, 16 Sep 2022 10:51:48 +0200 Subject: Improve docs and update pkgdown --- docs/dev/reference/saem.html | 18 +++++++++++++----- 1 file changed, 13 insertions(+), 5 deletions(-) (limited to 'docs/dev/reference/saem.html') diff --git a/docs/dev/reference/saem.html b/docs/dev/reference/saem.html index b55f29a8..ce3d428c 100644 --- a/docs/dev/reference/saem.html +++ b/docs/dev/reference/saem.html @@ -124,7 +124,10 @@ Expectation Maximisation algorithm (SAEM).

... ) -saemix_data(object, verbose = FALSE, ...) +saemix_data(object, verbose = FALSE, ...) + +# S3 method for saem.mmkin +parms(object, ci = FALSE, ...)
@@ -199,6 +202,11 @@ and the end of the optimisation process?

digits

Number of digits to use for printing

+ +
ci
+

Should a matrix with estimates and confidence interval boundaries +be returned? If FALSE (default), a vector of estimates is returned.

+

Value

@@ -304,7 +312,7 @@ using mmkin.

#> Likelihoods calculated by importance sampling #> AIC BIC #> 1 467.8664 465.1324 -#> 2 469.9096 466.7851 +#> 2 469.8018 466.6773 sfo_sfo <- mkinmod(parent = mkinsub("SFO", "A1"), A1 = mkinsub("SFO")) @@ -365,8 +373,8 @@ using mmkin.

#> saemix version used for fitting: 3.1 #> mkin version used for pre-fitting: 1.1.2 #> R version used for fitting: 4.2.1 -#> Date of fit: Wed Aug 10 15:27:26 2022 -#> Date of summary: Wed Aug 10 15:27:26 2022 +#> Date of fit: Fri Sep 16 10:30:47 2022 +#> Date of summary: Fri Sep 16 10:30:47 2022 #> #> Equations: #> d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 * @@ -381,7 +389,7 @@ using mmkin.

#> #> Model predictions using solution type analytical #> -#> Fitted in 9.438 s +#> Fitted in 9.651 s #> Using 300, 100 iterations and 10 chains #> #> Variance model: Constant variance -- cgit v1.2.1