From a54bd290bc3884d0000c52c1b29bc557825d9eae Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Thu, 15 Dec 2022 14:50:28 +0100 Subject: List random effects correlations in output if any Update docs --- docs/dev/reference/saem.html | 21 +++++++++++++++++---- 1 file changed, 17 insertions(+), 4 deletions(-) (limited to 'docs/dev/reference/saem.html') diff --git a/docs/dev/reference/saem.html b/docs/dev/reference/saem.html index d18cb848..131b168b 100644 --- a/docs/dev/reference/saem.html +++ b/docs/dev/reference/saem.html @@ -432,8 +432,8 @@ using mmkin.

#> saemix version used for fitting: 3.2 #> mkin version used for pre-fitting: 1.2.2 #> R version used for fitting: 4.2.2 -#> Date of fit: Thu Nov 24 08:11:00 2022 -#> Date of summary: Thu Nov 24 08:11:01 2022 +#> Date of fit: Wed Dec 7 16:22:26 2022 +#> Date of summary: Wed Dec 7 16:22:26 2022 #> #> Equations: #> d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 * @@ -448,12 +448,12 @@ using mmkin.

#> #> Model predictions using solution type analytical #> -#> Fitted in 8.778 s +#> Fitted in 8.508 s #> Using 300, 100 iterations and 10 chains #> #> Variance model: Constant variance #> -#> Mean of starting values for individual parameters: +#> Starting values for degradation parameters: #> parent_0 log_k_A1 f_parent_qlogis log_k1 log_k2 #> 93.8102 -5.3734 -0.9711 -1.8799 -4.2708 #> g_qlogis @@ -462,6 +462,19 @@ using mmkin.

#> Fixed degradation parameter values: #> None #> +#> Starting values for random effects (square root of initial entries in omega): +#> parent_0 log_k_A1 f_parent_qlogis log_k1 log_k2 g_qlogis +#> parent_0 4.941 0.000 0.0000 0.000 0.000 0.0000 +#> log_k_A1 0.000 2.551 0.0000 0.000 0.000 0.0000 +#> f_parent_qlogis 0.000 0.000 0.7251 0.000 0.000 0.0000 +#> log_k1 0.000 0.000 0.0000 1.449 0.000 0.0000 +#> log_k2 0.000 0.000 0.0000 0.000 2.228 0.0000 +#> g_qlogis 0.000 0.000 0.0000 0.000 0.000 0.7814 +#> +#> Starting values for error model parameters: +#> a.1 +#> 1 +#> #> Results: #> #> Likelihood computed by importance sampling -- cgit v1.2.1