From db9ae6a0c9cecb92048fde6f06af1da183c09b5f Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Thu, 19 Nov 2020 15:41:24 +0100 Subject: Depend on parallel, doc improvements By depending on parallel instead of importing it, functions to set up and stop a cluster are always available when mkin is loaded. The use of multicore processing in mmkin on Windows is now documented in the help file, which brings mkin closer to a version 1.0 #9. --- docs/dev/reference/summary.nlme.mmkin.html | 23 ++++++++++++----------- 1 file changed, 12 insertions(+), 11 deletions(-) (limited to 'docs/dev/reference/summary.nlme.mmkin.html') diff --git a/docs/dev/reference/summary.nlme.mmkin.html b/docs/dev/reference/summary.nlme.mmkin.html index d35e8713..d016796e 100644 --- a/docs/dev/reference/summary.nlme.mmkin.html +++ b/docs/dev/reference/summary.nlme.mmkin.html @@ -265,8 +265,8 @@ José Pinheiro and Douglas Bates for the components inherited from nlme

#> nlme version used for fitting: 3.1.150.1 #> mkin version used for pre-fitting: 0.9.50.4 #> R version used for fitting: 4.0.3 -#> Date of fit: Sat Nov 7 13:28:06 2020 -#> Date of summary: Sat Nov 7 13:28:06 2020 +#> Date of fit: Thu Nov 19 14:59:43 2020 +#> Date of summary: Thu Nov 19 14:59:43 2020 #> #> Equations: #> d_parent/dt = - k_parent * parent @@ -276,7 +276,7 @@ José Pinheiro and Douglas Bates for the components inherited from nlme

#> #> Model predictions using solution type analytical #> -#> Fitted in 0.588 s using 5 iterations +#> Fitted in 0.681 s using 5 iterations #> #> Variance model: Two-component variance function #> @@ -293,24 +293,20 @@ José Pinheiro and Douglas Bates for the components inherited from nlme

#> 555.792 570.7908 -271.896 #> #> Optimised, transformed parameters with symmetric confidence intervals: -#> lower est. upper -#> parent_0 94.701336 97.763446 100.82556 -#> log_k_parent -5.007574 -4.461767 -3.91596 +#> lower est. upper +#> parent_0 94.701 97.763 100.826 +#> log_k_parent -5.008 -4.462 -3.916 #> #> Correlation: #> prnt_0 #> log_k_parent 0.024 #> -#> Backtransformed parameters with asymmetric confidence intervals: -#> lower est. upper -#> parent_0 94.701335804 97.76344625 100.82555670 -#> k_parent 0.006687109 0.01154195 0.01992142 #> Random effects: #> Formula: list(parent_0 ~ 1, log_k_parent ~ 1) #> Level: ds #> Structure: Diagonal #> parent_0 log_k_parent Residual -#> StdDev: 16.65969 3.516961 5.709013 +#> StdDev: 2.898 0.6119 1 #> #> Variance function: #> Structure: Constant plus proportion of variance covariate @@ -319,6 +315,11 @@ José Pinheiro and Douglas Bates for the components inherited from nlme

#> const prop #> 1.55075176 0.05680853 #> +#> Backtransformed parameters with asymmetric confidence intervals: +#> lower est. upper +#> parent_0 94.701336 97.76345 100.82556 +#> k_parent 0.006687 0.01154 0.01992 +#> #> Estimated disappearance times: #> DT50 DT90 #> parent 60.05 199.5 -- cgit v1.2.1