From 34ec60f1b140d788880d84b70cb62b344f7d74b9 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Sun, 16 Apr 2023 13:42:23 +0200 Subject: Complete rebuild of static docs --- docs/dev/reference/summary.saem.mmkin.html | 29 ++++++++++++++++++++++++----- 1 file changed, 24 insertions(+), 5 deletions(-) (limited to 'docs/dev/reference/summary.saem.mmkin.html') diff --git a/docs/dev/reference/summary.saem.mmkin.html b/docs/dev/reference/summary.saem.mmkin.html index aa573589..e434ad8d 100644 --- a/docs/dev/reference/summary.saem.mmkin.html +++ b/docs/dev/reference/summary.saem.mmkin.html @@ -119,7 +119,15 @@ endpoints such as formation fractions and DT50 values. Optionally 
# S3 method for saem.mmkin
-summary(object, data = FALSE, verbose = FALSE, distimes = TRUE, ...)
+summary(
+  object,
+  data = FALSE,
+  verbose = FALSE,
+  covariates = NULL,
+  covariate_quantile = 0.5,
+  distimes = TRUE,
+  ...
+)
 
 # S3 method for summary.saem.mmkin
 print(x, digits = max(3, getOption("digits") - 3), verbose = x$verbose, ...)
@@ -140,6 +148,17 @@ the summary.

Should the summary be verbose?

+
covariates
+

Numeric vector with covariate values for all variables in +any covariate models in the object. If given, it overrides 'covariate_quantile'.

+ + +
covariate_quantile
+

This argument only has an effect if the fitted +object has covariate models. If so, the default is to show endpoints +for the median of the covariate values (50th percentile).

+ +
distimes

logical, indicating whether DT50 and DT90 values should be included.

@@ -312,9 +331,9 @@ saemix authors for the parts inherited from saemix.

summary(f_saem_dfop_sfo_2, data = TRUE) #> saemix version used for fitting: 3.2 #> mkin version used for pre-fitting: 1.2.3 -#> R version used for fitting: 4.2.2 -#> Date of fit: Fri Feb 17 22:24:21 2023 -#> Date of summary: Fri Feb 17 22:24:21 2023 +#> R version used for fitting: 4.2.3 +#> Date of fit: Sun Apr 16 08:34:58 2023 +#> Date of summary: Sun Apr 16 08:34:58 2023 #> #> Equations: #> d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 * @@ -329,7 +348,7 @@ saemix authors for the parts inherited from saemix.

#> #> Model predictions using solution type analytical #> -#> Fitted in 9.426 s +#> Fitted in 9.384 s #> Using 300, 100 iterations and 10 chains #> #> Variance model: Two-component variance function -- cgit v1.2.1