From 630e657f1794ea441afc9ff10663309fec5e847e Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Tue, 1 Nov 2022 14:16:21 +0100 Subject: Update online docs --- docs/dev/reference/summary.saem.mmkin.html | 39 ++++++++++++++++++------------ 1 file changed, 23 insertions(+), 16 deletions(-) (limited to 'docs/dev/reference/summary.saem.mmkin.html') diff --git a/docs/dev/reference/summary.saem.mmkin.html b/docs/dev/reference/summary.saem.mmkin.html index 1a6da753..d8a41356 100644 --- a/docs/dev/reference/summary.saem.mmkin.html +++ b/docs/dev/reference/summary.saem.mmkin.html @@ -21,7 +21,7 @@ endpoints such as formation fractions and DT50 values. Optionally mkin - 1.1.2 + 1.2.0 @@ -48,11 +48,14 @@ endpoints such as formation fractions and DT50 values. Optionally Example evaluations of dimethenamid data from 2018 with nonlinear mixed-effects models
  • - Example evaluation of FOCUS Example Dataset Z + Short demo of the multistart method
  • Performance benefit by using compiled model definitions in mkin
    • +
  • + Example evaluation of FOCUS Example Dataset Z +
  • Calculation of time weighted average concentrations with mkin
    • @@ -262,7 +265,6 @@ saemix authors for the parts inherited from saemix.

    #> [1] "sd(parent_0)" "sd(log_k_m1)" "sd(g_qlogis)" f_saem_dfop_sfo_2 <- update(f_saem_dfop_sfo, covariance.model = diag(c(0, 0, 1, 1, 1, 0))) illparms(f_saem_dfop_sfo_2) -#> character(0) intervals(f_saem_dfop_sfo_2) #> Approximate 95% confidence intervals #> @@ -286,11 +288,11 @@ saemix authors for the parts inherited from saemix.

    #> a.1 0.70273100 0.88750764 1.07228428 #> b.1 0.06781347 0.08328016 0.09874685 summary(f_saem_dfop_sfo_2, data = TRUE) -#> saemix version used for fitting: 3.1 -#> mkin version used for pre-fitting: 1.1.2 -#> R version used for fitting: 4.2.1 -#> Date of fit: Fri Sep 16 10:31:33 2022 -#> Date of summary: Fri Sep 16 10:31:33 2022 +#> saemix version used for fitting: 3.2 +#> mkin version used for pre-fitting: 1.2.0 +#> R version used for fitting: 4.2.2 +#> Date of fit: Tue Nov 1 14:12:50 2022 +#> Date of summary: Tue Nov 1 14:12:50 2022 #> #> Equations: #> d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 * @@ -305,7 +307,7 @@ saemix authors for the parts inherited from saemix.

    #> #> Model predictions using solution type analytical #> -#> Fitted in 27.615 s +#> Fitted in 25.006 s #> Using 300, 100 iterations and 10 chains #> #> Variance model: Two-component variance function @@ -326,13 +328,18 @@ saemix authors for the parts inherited from saemix.

    #> 825.6 821.3 -401.8 #> #> Optimised parameters: -#> est. lower upper -#> parent_0 100.4624 97.5484 103.3763 -#> log_k_m1 -4.0576 -4.1504 -3.9647 -#> f_parent_qlogis -0.9136 -1.3240 -0.5031 -#> log_k1 -2.8822 -3.6302 -2.1341 -#> log_k2 -3.6307 -4.3226 -2.9388 -#> g_qlogis 0.0519 -0.7783 0.8821 +#> est. lower upper +#> parent_0 100.46239 97.54845 103.37634 +#> log_k_m1 -4.05756 -4.15040 -3.96472 +#> f_parent_qlogis -0.91358 -1.32403 -0.50312 +#> log_k1 -2.88215 -3.63019 -2.13412 +#> log_k2 -3.63069 -4.32261 -2.93876 +#> g_qlogis 0.05190 -0.77834 0.88213 +#> a.1 0.88751 0.70273 1.07228 +#> b.1 0.08328 0.06781 0.09875 +#> SD.f_parent_qlogis 0.44712 0.16584 0.72840 +#> SD.log_k1 0.79292 0.27688 1.30896 +#> SD.log_k2 0.75661 0.26936 1.24386 #> #> Correlation: #> parnt_0 lg_k_m1 f_prnt_ log_k1 log_k2 -- cgit v1.2.1