From 6653ff2507f45eae909f491a9af3f1eb5358a600 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Thu, 1 Mar 2018 14:32:46 +0100 Subject: Static documentation rebuilt using current pkgdown::build_site() --- docs/reference/Extract.mmkin.html | 57 ++++++++++++++++++++++++--------------- 1 file changed, 36 insertions(+), 21 deletions(-) (limited to 'docs/reference/Extract.mmkin.html') diff --git a/docs/reference/Extract.mmkin.html b/docs/reference/Extract.mmkin.html index 5d4eca29..11738484 100644 --- a/docs/reference/Extract.mmkin.html +++ b/docs/reference/Extract.mmkin.html @@ -18,12 +18,19 @@ + + + + + + + @@ -69,6 +76,9 @@
  • Example evaluation of FOCUS Laboratory Data L1 to L3
    • +
  • + Example evaluation of FOCUS Example Dataset Z +
  • Performance benefit by using compiled model definitions in mkin
    • @@ -83,12 +93,7 @@ @@ -147,16 +152,16 @@ cores = 1, quiet = TRUE) fits["FOMC", ]
    #> dataset #> model B C -#> FOMC List,42 List,42 +#> FOMC List,45 List,45 #> attr(,"class") #> [1] "mmkin"
    fits[, "B"]
    #> dataset #> model B -#> SFO List,42 -#> FOMC List,42 +#> SFO List,45 +#> FOMC List,45 #> attr(,"class") #> [1] "mmkin"
    fits["SFO", "B"]
    #> dataset #> model B -#> SFO List,42 +#> SFO List,45 #> attr(,"class") #> [1] "mmkin"
    head( @@ -164,7 +169,7 @@ fits[["FOMC", "B"]] )
    #> $par #> parent_0 log_alpha log_beta -#> 99.666192 2.549849 5.050586 +#> 99.666193 2.549849 5.050586 #> #> $ssr #> [1] 28.58291 @@ -180,7 +185,7 @@ #> 25 78 #> #> $counts -#> [1] "both X-convergence and relative convergence (5)" +#> [1] "relative convergence (4)" #>
    head( # The same can be achieved by @@ -258,7 +263,7 @@ #> #> $time #> user system elapsed -#> 0.064 0.000 0.063 +#> 0.058 0.000 0.057 #> #> $mkinmod #> <mkinmod> model generated with @@ -398,7 +403,7 @@ #> { #> assign("calls", calls + 1, inherits = TRUE) #> if (trace_parms) -#> cat(P, "\\n") +#> cat(P, "\n") #> if (length(state.ini.optim) > 0) { #> odeini <- c(P[1:length(state.ini.optim)], state.ini.fixed) #> names(odeini) <- c(state.ini.optim.boxnames, state.ini.fixed.boxnames) @@ -420,7 +425,7 @@ #> if (mC$model < cost.old) { #> if (!quiet) #> cat("Model cost at call ", calls, ": ", mC$model, -#> "\\n") +#> "\n") #> if (plot) { #> outtimes_plot = seq(min(observed$time), max(observed$time), #> length.out = 100) @@ -447,8 +452,8 @@ #> } #> return(mC) #> } -#> <bytecode: 0x560110508c60> -#> <environment: 0x56010f8d8c30> +#> <bytecode: 0x55555ad80908> +#> <environment: 0x55555b1b4b90> #> #> $cost_notrans #> function (P) @@ -470,8 +475,8 @@ #> scaleVar = scaleVar) #> return(mC) #> } -#> <bytecode: 0x56010fede550> -#> <environment: 0x56010f8d8c30> +#> <bytecode: 0x55555b174428> +#> <environment: 0x55555b1b4b90> #> #> $hessian_notrans #> parent_0 k_parent_sink @@ -512,6 +517,10 @@ #> $weight.ini #> [1] "none" #> +#> $tc.ini +#> sigma_low rsd_high +#> 0.50 0.07 +#> #> $reweight.tol #> [1] 1e-08 #> @@ -534,7 +543,13 @@ #> 99.17407 #> #> $date -#> [1] "Sat Jul 29 15:14:04 2017" +#> [1] "Thu Mar 1 14:26:09 2018" +#> +#> $version +#> [1] "0.9.47.1" +#> +#> $Rversion +#> [1] "3.4.3" #> #> attr(,"class") #> [1] "mkinfit" "modFit" @@ -563,7 +578,7 @@
    -

    Site built with pkgdown.

    +

    Site built with pkgdown.

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