From 194659fcaccdd1ee37851725b8c72e99daa3a8cf Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Wed, 10 Apr 2019 10:17:35 +0200 Subject: Adapt tests, vignettes and examples - Write the NEWS - Static documentation rebuilt by pkgdown - Adapt mkinerrmin - Fix (hopefully all) remaining problems in mkinfit --- docs/reference/NAFTA_SOP_2015.html | 30 ++++++++++++++++-------------- 1 file changed, 16 insertions(+), 14 deletions(-) (limited to 'docs/reference/NAFTA_SOP_2015.html') diff --git a/docs/reference/NAFTA_SOP_2015.html b/docs/reference/NAFTA_SOP_2015.html index b2aba7ef..513cb128 100644 --- a/docs/reference/NAFTA_SOP_2015.html +++ b/docs/reference/NAFTA_SOP_2015.html @@ -63,7 +63,7 @@ mkin - 0.9.48.1 + 0.9.49.4 @@ -155,8 +155,7 @@

Examples

- 
  nafta_evaluation <- nafta(NAFTA_SOP_Appendix_D, cores = 1)
#> Warning: Calculation of the Jacobian failed for the cost function of the untransformed model.
-#> No t-test results will be available
#> The SFO model is rejected as S_SFO is equal or higher than the critical value S_c
#> The representative half-life of the IORE model is longer than the one corresponding
#> to the terminal degradation rate found with the DFOP model.
#> The representative half-life obtained from the DFOP model may be used
  print(nafta_evaluation)
#> Sums of squares:
+    
  nafta_evaluation <- nafta(NAFTA_SOP_Appendix_D, cores = 1)
#> The SFO model is rejected as S_SFO is equal or higher than the critical value S_c
#> The representative half-life of the IORE model is longer than the one corresponding
#> to the terminal degradation rate found with the DFOP model.
#> The representative half-life obtained from the DFOP model may be used
  print(nafta_evaluation)
#> Sums of squares:
 #>       SFO      IORE      DFOP 
 #> 1378.6832  615.7730  517.8836 
 #> 
@@ -165,22 +164,25 @@
 #> 
 #> Parameters:
 #> $SFO
-#>               Estimate   Pr(>t)    Lower    Upper
-#> parent_0       83.7558 8.08e-15 76.92822 90.58328
-#> k_parent_sink   0.0017 7.45e-05  0.00111  0.00262
+#>               Estimate   Pr(>t)    Lower   Upper
+#> parent_0       83.7558 1.80e-14 77.18268 90.3288
+#> k_parent_sink   0.0017 7.43e-05  0.00112  0.0026
+#> sigma           8.7518 1.22e-05  5.64278 11.8608
 #> 
 #> $IORE
 #>                     Estimate Pr(>t)    Lower    Upper
-#> parent_0            9.69e+01     NA 8.75e+01 1.06e+02
-#> k__iore_parent_sink 8.40e-14     NA 1.09e-19 6.47e-08
-#> N_parent            6.68e+00     NA 3.54e+00 9.83e+00
+#> parent_0            9.69e+01     NA 8.88e+01 1.05e+02
+#> k__iore_parent_sink 8.40e-14     NA 1.79e-18 3.94e-09
+#> N_parent            6.68e+00     NA 4.19e+00 9.17e+00
+#> sigma               5.85e+00     NA 3.76e+00 7.94e+00
 #> 
 #> $DFOP
 #>          Estimate   Pr(>t)    Lower    Upper
-#> parent_0 9.76e+01 4.44e-13 8.88e+01 1.06e+02
-#> k1       4.24e-02 3.55e-02 1.41e-02 1.27e-01
-#> k2       8.24e-04 2.06e-02 3.17e-04 2.14e-03
-#> g        2.88e-01 1.31e-04 1.78e-01 4.30e-01
+#> parent_0 9.76e+01 1.94e-13 9.02e+01 1.05e+02
+#> k1       4.24e-02 5.92e-03 2.03e-02 8.88e-02
+#> k2       8.24e-04 6.48e-03 3.89e-04 1.75e-03
+#> g        2.88e-01 2.47e-05 1.95e-01 4.03e-01
+#> sigma    5.36e+00 2.22e-05 3.43e+00 7.30e+00
 #> 
 #> 
 #> DTx values:
@@ -190,7 +192,7 @@
 #> DFOP  429    2380      841
 #> 
 #> Representative half-life:
-#> [1] 841.4096
  plot(nafta_evaluation)

+#> [1] 841.4094
  plot(nafta_evaluation)