From 2bb59c88d49b193f278916ad9cc4de83c0de9604 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Wed, 2 Mar 2022 18:03:54 +0100 Subject: Make tests more platform independent, update docs --- docs/reference/NAFTA_SOP_Attachment.html | 224 ++++++++++++------------------- 1 file changed, 84 insertions(+), 140 deletions(-) (limited to 'docs/reference/NAFTA_SOP_Attachment.html') diff --git a/docs/reference/NAFTA_SOP_Attachment.html b/docs/reference/NAFTA_SOP_Attachment.html index 0b063e2c..e602a2b0 100644 --- a/docs/reference/NAFTA_SOP_Attachment.html +++ b/docs/reference/NAFTA_SOP_Attachment.html @@ -1,67 +1,12 @@ - - - - - - - -Example datasets from Attachment 1 to the NAFTA SOP published 2015 — NAFTA_SOP_Attachment • mkin - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -Example datasets from Attachment 1 to the NAFTA SOP published 2015 — NAFTA_SOP_Attachment • mkin - - - - + + -
-
- -
- -
+
-
NAFTA_SOP_Attachment
- - -

Format

+
+
NAFTA_SOP_Attachment
+
+
+

Format

A list (NAFTA_SOP_Attachment) containing 16 datasets suitable - for the evaluation with nafta

-

Source

- + for the evaluation with nafta

+
+
+

Source

NAFTA (2011) Guidance for evaluating and calculating degradation kinetics in environmental media. NAFTA Technical Working Group on Pesticides - https://www.epa.gov/pesticide-science-and-assessing-pesticide-risks/guidance-evaluating-and-calculating-degradation + https://www.epa.gov/pesticide-science-and-assessing-pesticide-risks/guidance-evaluating-and-calculating-degradation accessed 2019-02-22

US EPA (2015) Standard Operating Procedure for Using the NAFTA Guidance to Calculate Representative Half-life Values and Characterizing Pesticide Degradation - https://www.epa.gov/pesticide-science-and-assessing-pesticide-risks/standard-operating-procedure-using-nafta-guidance

- -

Examples

-
nafta_att_p5a <- nafta(NAFTA_SOP_Attachment[["p5a"]], cores = 1) -
#> The SFO model is rejected as S_SFO is equal or higher than the critical value S_c
#> The half-life obtained from the IORE model may be used
print(nafta_att_p5a) -
#> Sums of squares: -#> SFO IORE DFOP -#> 465.21753 56.27506 32.06401 -#> -#> Critical sum of squares for checking the SFO model: -#> [1] 64.4304 -#> -#> Parameters: -#> $SFO -#> Estimate Pr(>t) Lower Upper -#> parent_0 95.8401 4.67e-21 92.245 99.4357 -#> k_parent 0.0102 3.92e-12 0.009 0.0117 -#> sigma 4.8230 3.81e-06 3.214 6.4318 -#> -#> $IORE -#> Estimate Pr(>t) Lower Upper -#> parent_0 1.01e+02 NA 9.91e+01 1.02e+02 -#> k__iore_parent 1.54e-05 NA 4.08e-06 5.84e-05 -#> N_parent 2.57e+00 NA 2.25e+00 2.89e+00 -#> sigma 1.68e+00 NA 1.12e+00 2.24e+00 -#> -#> $DFOP -#> Estimate Pr(>t) Lower Upper -#> parent_0 9.99e+01 1.41e-26 98.8116 101.0810 -#> k1 2.67e-02 5.05e-06 0.0243 0.0295 -#> k2 2.26e-12 5.00e-01 0.0000 Inf -#> g 6.47e-01 3.67e-06 0.6248 0.6677 -#> sigma 1.27e+00 8.91e-06 0.8395 1.6929 -#> -#> -#> DTx values: -#> DT50 DT90 DT50_rep -#> SFO 67.7 2.25e+02 6.77e+01 -#> IORE 58.2 1.07e+03 3.22e+02 -#> DFOP 55.5 5.59e+11 3.07e+11 -#> -#> Representative half-life: -#> [1] 321.51
plot(nafta_att_p5a) -
+ https://www.epa.gov/pesticide-science-and-assessing-pesticide-risks/standard-operating-procedure-using-nafta-guidance

+
+ +
+

Examples

+
  nafta_att_p5a <- nafta(NAFTA_SOP_Attachment[["p5a"]], cores = 1)
+#> The SFO model is rejected as S_SFO is equal or higher than the critical value S_c
+#> The half-life obtained from the IORE model may be used
+  print(nafta_att_p5a)
+#> Sums of squares:
+#>       SFO      IORE      DFOP 
+#> 465.21753  56.27506  32.06401 
+#> 
+#> Critical sum of squares for checking the SFO model:
+#> [1] 64.4304
+#> 
+#> Parameters:
+#> $SFO
+#>          Estimate   Pr(>t)  Lower   Upper
+#> parent_0  95.8401 4.67e-21 92.245 99.4357
+#> k_parent   0.0102 3.92e-12  0.009  0.0117
+#> sigma      4.8230 3.81e-06  3.214  6.4318
+#> 
+#> $IORE
+#>                Estimate Pr(>t)    Lower    Upper
+#> parent_0       1.01e+02     NA 9.91e+01 1.02e+02
+#> k__iore_parent 1.54e-05     NA 4.08e-06 5.84e-05
+#> N_parent       2.57e+00     NA 2.25e+00 2.89e+00
+#> sigma          1.68e+00     NA 1.12e+00 2.24e+00
+#> 
+#> $DFOP
+#>          Estimate   Pr(>t)   Lower    Upper
+#> parent_0 9.99e+01 1.41e-26 98.8116 101.0810
+#> k1       2.67e-02 5.05e-06  0.0243   0.0295
+#> k2       2.26e-12 5.00e-01  0.0000      Inf
+#> g        6.47e-01 3.67e-06  0.6248   0.6677
+#> sigma    1.27e+00 8.91e-06  0.8395   1.6929
+#> 
+#> 
+#> DTx values:
+#>      DT50     DT90 DT50_rep
+#> SFO  67.7 2.25e+02 6.77e+01
+#> IORE 58.2 1.07e+03 3.22e+02
+#> DFOP 55.5 5.59e+11 3.07e+11
+#> 
+#> Representative half-life:
+#> [1] 321.51
+  plot(nafta_att_p5a)
+
+
+
+
-
- - + + -- cgit v1.2.1