From 7035cde3a53781721fe15a8893fdf328c789bdd2 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Mon, 7 Mar 2022 12:03:40 +0100 Subject: Remove nlmixr interface for release of mkin 1.1.0 I am postponing my attempts to get the nlmixr interface to CRAN, given some problems with nlmixr using R-devel under Windows, see https://github.com/nlmixrdevelopment/nlmixr/issues/596 and https://github.com/r-hub/rhub/issues/512, which is fixed by the removal of nlmixr from the testsuite. For the tests to be more platform independent, the biphasic mixed effects models test dataset was defined in a way that fitting should be more robust (less ill-defined). --- docs/reference/index.html | 18 +----------------- 1 file changed, 1 insertion(+), 17 deletions(-) (limited to 'docs/reference/index.html') diff --git a/docs/reference/index.html b/docs/reference/index.html index 552829bf..90387a56 100644 --- a/docs/reference/index.html +++ b/docs/reference/index.html @@ -26,7 +26,7 @@ Functions and data
  • -

    saem() print(<saem.mmkin>) saemix_model() saemix_data()

    Fit nonlinear mixed models with SAEM

    - -

    nlmixr(<mmkin>) print(<nlmixr.mmkin>) nlmixr_model() nlmixr_data()

    - -

    Fit nonlinear mixed models using nlmixr

    plot(<mixed.mmkin>)

    @@ -191,10 +187,6 @@ of an mmkin object

    summary(<nlme.mmkin>) print(<summary.nlme.mmkin>)

    Summary method for class "nlme.mmkin"

    - -

    summary(<nlmixr.mmkin>) print(<summary.nlmixr.mmkin>)

    - -

    Summary method for class "nlmixr.mmkin"

    summary(<saem.mmkin>) print(<summary.saem.mmkin>)

    @@ -219,10 +211,6 @@ of an mmkin object

    intervals(<saem.mmkin>)

    Confidence intervals for parameters in saem.mmkin objects

    - -

    intervals(<nlmixr.mmkin>)

    - -

    Confidence intervals for parameters in nlmixr.mmkin objects

    Datasets and known results

    @@ -344,10 +332,6 @@ kinetic models fitted with mkinfit

    ilr() invilr()

    Function to perform isometric log-ratio transformation

    - -

    tffm0() invtffm0()

    - -

    Transform formation fractions as in the first published mkin version

    logLik(<mkinfit>)

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