From 70591022c07f0e8fb4dd67789b7c8d78af8ebc18 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Thu, 2 May 2019 13:17:05 +0200 Subject: Better initials for error model parameters - Also make it possible to specify initial values for error model parameters. - Run tests - Rebuild docs --- docs/reference/mccall81_245T.html | 20 ++++++++++---------- 1 file changed, 10 insertions(+), 10 deletions(-) (limited to 'docs/reference/mccall81_245T.html') diff --git a/docs/reference/mccall81_245T.html b/docs/reference/mccall81_245T.html index a336a840..1f0f6b50 100644 --- a/docs/reference/mccall81_245T.html +++ b/docs/reference/mccall81_245T.html @@ -160,14 +160,14 @@

Examples

  SFO_SFO_SFO <- mkinmod(T245 = list(type = "SFO", to = "phenol"),
                          phenol = list(type = "SFO", to = "anisole"),
-                         anisole = list(type = "SFO"))
#> Successfully compiled differential equation model from auto-generated C code.
  
    fit.1 <- mkinfit(SFO_SFO_SFO, subset(mccall81_245T, soil == "Commerce"), quiet = TRUE)
#> Warning: Observations with value of zero were removed from the data
    summary(fit.1)$bpar
#> Warning: NaNs wurden erzeugt
#>                      Estimate   se_notrans   t value       Pr(>t)        Lower
-#> T245_0           1.038550e+02 2.1508106806 48.286460 3.542223e-18 99.246062186
-#> k_T245_sink      1.636106e-02          NaN       NaN          NaN  0.012661557
-#> k_T245_phenol    2.700936e-02          NaN       NaN          NaN  0.024487315
-#> k_phenol_sink    1.054519e-10          NaN       NaN          NaN  0.000000000
-#> k_phenol_anisole 4.050581e-01 0.1053797258  3.843795 7.969973e-04  0.218013983
-#> k_anisole_sink   6.678742e-03 0.0006205825 10.762053 9.427693e-09  0.005370739
-#> sigma            2.514628e+00 0.3383657682  7.431685 1.054052e-06  1.706607296
+                         anisole = list(type = "SFO"))
#> Successfully compiled differential equation model from auto-generated C code.
  
    fit.1 <- mkinfit(SFO_SFO_SFO, subset(mccall81_245T, soil == "Commerce"), quiet = TRUE)
#> Warning: Observations with value of zero were removed from the data
    summary(fit.1)$bpar
#> Warning: NaNs wurden erzeugt
#>                      Estimate  se_notrans   t value       Pr(>t)        Lower
+#> T245_0           1.038550e+02 2.150809526 48.286486 3.542195e-18 99.246062243
+#> k_T245_sink      1.636106e-02         NaN       NaN          NaN  0.012661558
+#> k_T245_phenol    2.700936e-02         NaN       NaN          NaN  0.024487315
+#> k_phenol_sink    1.187912e-10         NaN       NaN          NaN  0.000000000
+#> k_phenol_anisole 4.050581e-01 0.105378416  3.843843 7.969195e-04  0.218013983
+#> k_anisole_sink   6.678742e-03 0.000620576 10.762166 9.426361e-09  0.005370739
+#> sigma            2.514628e+00 0.338361458  7.431780 1.053891e-06  1.706607296
 #>                         Upper
 #> T245_0           1.084640e+02
 #> k_T245_sink      2.114150e-02
@@ -177,7 +177,7 @@
 #> k_anisole_sink   8.305299e-03
 #> sigma            3.322649e+00
    endpoints(fit.1)
#> $ff
 #>      T245_sink    T245_phenol    phenol_sink phenol_anisole   anisole_sink 
-#>   3.772401e-01   6.227599e-01   2.603376e-10   1.000000e+00   1.000000e+00 
+#>   3.772401e-01   6.227599e-01   2.932696e-10   1.000000e+00   1.000000e+00 
 #> 
 #> $SFORB
 #> logical(0)
@@ -205,7 +205,7 @@
 #> k_anisole_sink   8.295501e-03
 #> sigma            3.318272e+00
    endpoints(fit.1)
#> $ff
 #>      T245_sink    T245_phenol    phenol_sink phenol_anisole   anisole_sink 
-#>   3.772401e-01   6.227599e-01   2.603376e-10   1.000000e+00   1.000000e+00 
+#>   3.772401e-01   6.227599e-01   2.932696e-10   1.000000e+00   1.000000e+00 
 #> 
 #> $SFORB
 #> logical(0)
-- 
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