From 8f38147e145c66ebd27f5d9fcc6f00172c25872f Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Wed, 26 Oct 2016 23:18:20 +0200 Subject: Static documentation rebuilt by pkgdown::build_site() --- docs/reference/mccall81_245T.html | 77 ++++++++++++++++++++++++--------------- 1 file changed, 48 insertions(+), 29 deletions(-) (limited to 'docs/reference/mccall81_245T.html') diff --git a/docs/reference/mccall81_245T.html b/docs/reference/mccall81_245T.html index 63635f9a..7a96be3b 100644 --- a/docs/reference/mccall81_245T.html +++ b/docs/reference/mccall81_245T.html @@ -6,14 +6,14 @@ -mccall81_245T. mkin + + — mccall81_245T • mkin - - + @@ -22,6 +22,7 @@ + @@ -34,10 +35,9 @@ -
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- -
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Time course of 2,4,5-trichlorophenoxyacetic acid, and the corresponding 2,4,5-trichlorophenol and 2,4,5-trichloroanisole as recovered in diethylether @@ -85,31 +87,31 @@ 

mccall81_245T
-
-

Format

+

Format

-

A dataframe containing the following variables. +

A dataframe containing the following variables.

name
the name of the compound observed. Note that T245 is used as an acronym for 2,4,5-T. T245 is a legitimate object name in R, which is necessary for specifying models using - mkinmod.
+ mkinmod.
time
a numeric vector containing sampling times in days after treatment
value
a numeric vector containing concentrations in percent of applied radioactivity
soil
a factor containing the name of the soil

-
- -
-

Source

+ +

Source

-

McCall P, Vrona SA, Kelley SS (1981) Fate of uniformly carbon-14 ring labeled 2,4,5-Trichlorophenoxyacetic acid and 2,4-dichlorophenoxyacetic acid. J Agric Chem 29, 100-107 +

McCall P, Vrona SA, Kelley SS (1981) Fate of uniformly carbon-14 ring labeled 2,4,5-Trichlorophenoxyacetic acid and 2,4-dichlorophenoxyacetic acid. J Agric Chem 29, 100-107 http://dx.doi.org/10.1021/jf00103a026

-
-

Examples

- 
  SFO_SFO_SFO <- mkinmod(T245 = list(type = "SFO", to = "phenol"),
+
+    

+      
+      Examples
+    

+    
  SFO_SFO_SFO <- mkinmod(T245 = list(type = "SFO", to = "phenol"),
                          phenol = list(type = "SFO", to = "anisole"),
                          anisole = list(type = "SFO"))
Successfully compiled differential equation model from auto-generated C code.
  ## Not run: ------------------------------------
 #     fit.1 <- mkinfit(SFO_SFO_SFO, subset(mccall81_245T, soil == "Commerce"))
@@ -117,13 +119,13 @@
 #   
 ## ---------------------------------------------
   # No covariance matrix and k_phenol_sink is really small, therefore fix it to zero
-  fit.2 <- mkinfit(SFO_SFO_SFO, subset(mccall81_245T, soil == "Commerce"),
+  fit.2 <- mkinfit(SFO_SFO_SFO, subset(mccall81_245T, soil == "Commerce"),
                  parms.ini = c(k_phenol_sink = 0),
                  fixed_parms = "k_phenol_sink", quiet = TRUE)
   summary(fit.2, data = FALSE)
#> mkin version:    0.9.44.9000 
 #> R version:       3.3.1 
-#> Date of fit:     Thu Oct  6 10:47:34 2016 
-#> Date of summary: Thu Oct  6 10:47:34 2016 
+#> Date of fit:     Wed Oct 26 23:16:47 2016 
+#> Date of summary: Wed Oct 26 23:16:47 2016 
 #> 
 #> Equations:
 #> d_T245 = - k_T245_sink * T245 - k_T245_phenol * T245
@@ -133,7 +135,7 @@
 #> 
 #> Model predictions using solution type deSolve 
 #> 
-#> Fitted with method Port using 246 model solutions performed in 1.492 s
+#> Fitted with method Port using 246 model solutions performed in 1.487 s
 #> 
 #> Weighting: none
 #> 
@@ -216,12 +218,29 @@
 #> anisole 103.784 344.763
 #> 

   

-  

+
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