From 2bb59c88d49b193f278916ad9cc4de83c0de9604 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Wed, 2 Mar 2022 18:03:54 +0100 Subject: Make tests more platform independent, update docs --- docs/reference/mkinerrplot.html | 272 ++++++++++++++-------------------------- 1 file changed, 95 insertions(+), 177 deletions(-) (limited to 'docs/reference/mkinerrplot.html') diff --git a/docs/reference/mkinerrplot.html b/docs/reference/mkinerrplot.html index 361ce79a..5dc188fe 100644 --- a/docs/reference/mkinerrplot.html +++ b/docs/reference/mkinerrplot.html @@ -1,71 +1,16 @@ - - - - - - - -Function to plot squared residuals and the error model for an mkin object — mkinerrplot • mkin - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -Function to plot squared residuals and the error model for an mkin object — mkinerrplot • mkin - - - - - - - - - - + + - - - -
-
- -
- -
+

Function to plot squared residuals and the error model for an mkin object

- Source: R/mkinerrplot.R + Source: R/mkinerrplot.R
@@ -151,128 +90,107 @@ using the argument show_errplot = TRUE." />

This function plots the squared residuals for the specified subset of the observed variables from an mkinfit object. In addition, one or more dashed line(s) show the fitted error model. A combined plot of the fitted model -and this error model plot can be obtained with plot.mkinfit +and this error model plot can be obtained with plot.mkinfit using the argument show_errplot = TRUE.

- 
mkinerrplot(
-  object,
-  obs_vars = names(object$mkinmod$map),
-  xlim = c(0, 1.1 * max(object$data$predicted)),
-  xlab = "Predicted",
-  ylab = "Squared residual",
-  maxy = "auto",
-  legend = TRUE,
-  lpos = "topright",
-  col_obs = "auto",
-  pch_obs = "auto",
-  frame = TRUE,
-  ...
-)
+
+ 
mkinerrplot(
+  object,
+  obs_vars = names(object$mkinmod$map),
+  xlim = c(0, 1.1 * max(object$data$predicted)),
+  xlab = "Predicted",
+  ylab = "Squared residual",
+  maxy = "auto",
+  legend = TRUE,
+  lpos = "topright",
+  col_obs = "auto",
+  pch_obs = "auto",
+  frame = TRUE,
+  ...
+)
+
-

Arguments

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
object

A fit represented in an mkinfit object.

obs_vars

A character vector of names of the observed variables for +

+

Arguments

+
object
+

A fit represented in an mkinfit object.

+
obs_vars
+

A character vector of names of the observed variables for which residuals should be plotted. Defaults to all observed variables in -the model

xlim

plot range in x direction.

xlab

Label for the x axis.

ylab

Label for the y axis.

maxy

Maximum value of the residuals. This is used for the scaling of -the y axis and defaults to "auto".

legend

Should a legend be plotted?

lpos

Where should the legend be placed? Default is "topright". Will -be passed on to legend.

col_obs

Colors for the observed variables.

pch_obs

Symbols to be used for the observed variables.

frame

Should a frame be drawn around the plots?

...

further arguments passed to plot.

- -

Value

- +the model

+
xlim
+

plot range in x direction.

+
xlab
+

Label for the x axis.

+
ylab
+

Label for the y axis.

+
maxy
+

Maximum value of the residuals. This is used for the scaling of +the y axis and defaults to "auto".

+
legend
+

Should a legend be plotted?

+
lpos
+

Where should the legend be placed? Default is "topright". Will +be passed on to legend.

+
col_obs
+

Colors for the observed variables.

+
pch_obs
+

Symbols to be used for the observed variables.

+
frame
+

Should a frame be drawn around the plots?

+
...
+

further arguments passed to plot.

+
+
+

Value

Nothing is returned by this function, as it is called for its side effect, namely to produce a plot.

-

See also

- -

mkinplot, for a way to plot the data and the fitted +

+
+

See also

+

mkinplot, for a way to plot the data and the fitted lines of the mkinfit object.

-

Author

- +
+
+

Author

Johannes Ranke

+
-

Examples

- 

-# \dontrun{
-model <- mkinmod(parent = mkinsub("SFO", "m1"), m1 = mkinsub("SFO"))
-
#> Temporary DLL for differentials generated and loaded
fit <- mkinfit(model, FOCUS_2006_D, error_model = "tc", quiet = TRUE)
-
#> Warning: Observations with value of zero were removed from the data
mkinerrplot(fit)
-
# }
-
-
+
+

Examples

+ 

+# \dontrun{
+model <- mkinmod(parent = mkinsub("SFO", "m1"), m1 = mkinsub("SFO"))
+#> Temporary DLL for differentials generated and loaded
+fit <- mkinfit(model, FOCUS_2006_D, error_model = "tc", quiet = TRUE)
+mkinerrplot(fit)
+
+# }
+
+
+
+
- - - + + -- cgit v1.2.1