From 09f4f904af23a34d68d5d78482a5b9e12d9a9494 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Fri, 4 Nov 2016 15:38:09 +0100 Subject: Static documentation rebuilt by pkgdown::build_site() With updated pkgdown with my PR --- docs/reference/mkinfit.html | 21 ++++++++------------- 1 file changed, 8 insertions(+), 13 deletions(-) (limited to 'docs/reference/mkinfit.html') diff --git a/docs/reference/mkinfit.html b/docs/reference/mkinfit.html index 867fb9ff..b298d90a 100644 --- a/docs/reference/mkinfit.html +++ b/docs/reference/mkinfit.html @@ -61,12 +61,7 @@ @@ -256,7 +251,7 @@ to do transformations. If TRUE, the g parameter of the DFOP and HS models are also transformed, as they can also be seen as compositional data. The transformation used for these transformations is the - ilr transformation. + ilr transformation.
plot
@@ -332,11 +327,11 @@

Value

A list with "mkinfit" and "modFit" in the class attribute. - A summary can be obtained by summary.mkinfit.

+ A summary can be obtained by summary.mkinfit.

See also

-

Plotting methods plot.mkinfit and +

Plotting methods plot.mkinfit and mkinparplot.

Fitting of several models to several datasets in a single call to mmkin.

@@ -361,15 +356,15 @@ fit <- mkinfit("FOMC", FOCUS_2006_C, quiet = TRUE) summary(fit)
#> mkin version: 0.9.44.9000 #> R version: 3.3.2 -#> Date of fit: Thu Nov 3 17:46:27 2016 -#> Date of summary: Thu Nov 3 17:46:27 2016 +#> Date of fit: Fri Nov 4 15:36:41 2016 +#> Date of summary: Fri Nov 4 15:36:41 2016 #> #> Equations: #> d_parent = - (alpha/beta) * 1/((time/beta) + 1) * parent #> #> Model predictions using solution type analytical #> -#> Fitted with method Port using 64 model solutions performed in 0.147 s +#> Fitted with method Port using 64 model solutions performed in 0.156 s #> #> Weighting: none #> @@ -438,7 +433,7 @@ m1 = mkinsub("SFO"))
#> Successfully compiled differential equation model from auto-generated C code.
# Fit the model to the FOCUS example dataset D using defaults print(system.time(fit <- mkinfit(SFO_SFO, FOCUS_2006_D, solution_type = "eigen", quiet = TRUE)))
#> user system elapsed -#> 1.204 1.244 0.932
coef(fit)
#> parent_0 log_k_parent_sink log_k_parent_m1 log_k_m1_sink +#> 1.244 1.208 0.933
coef(fit)
#> parent_0 log_k_parent_sink log_k_parent_m1 log_k_m1_sink #> 99.59848 -3.03822 -2.98030 -5.24750
endpoints(fit)
#> $ff #> parent_sink parent_m1 m1_sink #> 0.485524 0.514476 1.000000 -- cgit v1.2.1