From 3a5463672c297b37c3c9135c8b144c48744c05d0 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Wed, 31 Mar 2021 19:42:17 +0200 Subject: Bug fix in plot.mkinfit In residual plots, use xlab and xlim if appropriate --- docs/reference/mkinfit.html | 28 ++++++++++++++-------------- 1 file changed, 14 insertions(+), 14 deletions(-) (limited to 'docs/reference/mkinfit.html') diff --git a/docs/reference/mkinfit.html b/docs/reference/mkinfit.html index 180f2ee7..2c162e49 100644 --- a/docs/reference/mkinfit.html +++ b/docs/reference/mkinfit.html @@ -80,7 +80,7 @@ likelihood function." /> mkin - 1.0.3 + 1.0.4 @@ -431,10 +431,10 @@ doi: 10.3390/environments6 # Use shorthand notation for parent only degradation fit <- mkinfit("FOMC", FOCUS_2006_C, quiet = TRUE) summary(fit) -
#> mkin version used for fitting: 1.0.3 -#> R version used for fitting: 4.0.3 -#> Date of fit: Mon Feb 15 13:43:26 2021 -#> Date of summary: Mon Feb 15 13:43:26 2021 +
#> mkin version used for fitting: 1.0.4 +#> R version used for fitting: 4.0.4 +#> Date of fit: Wed Mar 31 19:15:41 2021 +#> Date of summary: Wed Mar 31 19:15:41 2021 #> #> Equations: #> d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent @@ -574,10 +574,10 @@ doi: 10.3390/environments6 analytical = mkinfit(SFO_SFO, FOCUS_D, quiet = TRUE, error_model = "tc", solution_type = "analytical")) } -
#> test relative elapsed -#> 3 analytical 1.000 0.550 -#> 1 deSolve_compiled 1.731 0.952 -#> 2 eigen 2.662 1.464
# } +
#> Loading required package: rbenchmark
#> test relative elapsed +#> 3 analytical 1.000 0.547 +#> 1 deSolve_compiled 1.717 0.939 +#> 2 eigen 2.644 1.446
# } # Use stepwise fitting, using optimised parameters from parent only fit, FOMC-SFO # \dontrun{ @@ -598,10 +598,10 @@ doi: 10.3390/environments6 #> 2 6 -64.983 -1 0.3075 0.5792
# Also, the missing standard error for log_beta and the t-tests for alpha # and beta indicate overparameterisation summary(fit.FOMC_SFO.tc, data = FALSE) -
#> Warning: NaNs produced
#> Warning: NaNs produced
#> Warning: diag(.) had 0 or NA entries; non-finite result is doubtful
#> mkin version used for fitting: 1.0.3 -#> R version used for fitting: 4.0.3 -#> Date of fit: Mon Feb 15 13:43:38 2021 -#> Date of summary: Mon Feb 15 13:43:38 2021 +
#> Warning: NaNs produced
#> Warning: NaNs produced
#> Warning: diag(.) had 0 or NA entries; non-finite result is doubtful
#> mkin version used for fitting: 1.0.4 +#> R version used for fitting: 4.0.4 +#> Date of fit: Wed Mar 31 19:15:53 2021 +#> Date of summary: Wed Mar 31 19:15:53 2021 #> #> Equations: #> d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent @@ -610,7 +610,7 @@ doi: 10.3390/environments6 #> #> Model predictions using solution type deSolve #> -#> Fitted using 3729 model solutions performed in 2.802 s +#> Fitted using 3729 model solutions performed in 2.798 s #> #> Error model: Two-component variance function #> -- cgit v1.2.1