From b7901aac76df753ec1213cb02bebea055965ee87 Mon Sep 17 00:00:00 2001
From: Ranke Johannes <johannes.ranke@agroscope.admin.ch>
Date: Mon, 30 Oct 2023 17:09:21 +0100
Subject: Update static docs

---
 docs/reference/mkinmod.html | 11 +++++++----
 1 file changed, 7 insertions(+), 4 deletions(-)

(limited to 'docs/reference/mkinmod.html')

diff --git a/docs/reference/mkinmod.html b/docs/reference/mkinmod.html
index e4761e73..11a87acc 100644
--- a/docs/reference/mkinmod.html
+++ b/docs/reference/mkinmod.html
@@ -21,7 +21,7 @@ components."><!-- mathjax --><script src="https://cdnjs.cloudflare.com/ajax/libs
       </button>
       <span class="navbar-brand">
         <a class="navbar-link" href="../index.html">mkin</a>
-        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.2.4</span>
+        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.2.6</span>
       </span>
     </div>
 
@@ -57,6 +57,9 @@ components."><!-- mathjax --><script src="https://cdnjs.cloudflare.com/ajax/libs
     <li>
       <a href="../articles/prebuilt/2022_dmta_pathway.html">Testing hierarchical pathway kinetics with residue data on dimethenamid and dimethenamid-P</a>
     </li>
+    <li>
+      <a href="../articles/prebuilt/2023_mesotrione_parent.html">Testing covariate modelling in hierarchical parent degradation kinetics with residue data on mesotrione</a>
+    </li>
     <li>
       <a href="../articles/prebuilt/2022_cyan_pathway.html">Testing hierarchical pathway kinetics with residue data on cyantraniliprole</a>
     </li>
@@ -266,7 +269,7 @@ in the FOCUS and NAFTA guidance documents are used.</p>
 <p>For kinetic models with more than one observed variable, a symbolic solution
 of the system of differential equations is included in the resulting
 mkinmod object in some cases, speeding up the solution.</p>
-<p>If a C compiler is found by <code><a href="https://r-lib.github.io/pkgbuild/reference/has_compiler.html" class="external-link">pkgbuild::has_compiler()</a></code> and there
+<p>If a C compiler is found by <code><a href="https://pkgbuild.r-lib.org/reference/has_compiler.html" class="external-link">pkgbuild::has_compiler()</a></code> and there
 is more than one observed variable in the specification, C code is generated
 for evaluating the differential equations, compiled using
 <code><a href="https://rdrr.io/pkg/inline/man/cfunction.html" class="external-link">inline::cfunction()</a></code> and added to the resulting mkinmod object.</p>
@@ -330,7 +333,7 @@ Evaluating and Calculating Degradation Kinetics in Environmental Media</p>
 <span class="r-in"><span>   m1 <span class="op">=</span> <span class="fu">mkinsub</span><span class="op">(</span><span class="st">"SFO"</span>, full_name <span class="op">=</span> <span class="st">"Metabolite M1"</span><span class="op">)</span>,</span></span>
 <span class="r-in"><span>   name <span class="op">=</span> <span class="st">"SFO_SFO"</span>, dll_dir <span class="op">=</span> <span class="va">DLL_dir</span>, unload <span class="op">=</span> <span class="cn">TRUE</span>, overwrite <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span></span></span>
 <span class="r-msg co"><span class="r-pr">#&gt;</span> Temporary DLL for differentials generated and loaded</span>
-<span class="r-msg co"><span class="r-pr">#&gt;</span> Copied DLL from /tmp/RtmpUEfrXw/file723a02cdd855b.so to /home/jranke/.local/share/mkin/SFO_SFO.so</span>
+<span class="r-msg co"><span class="r-pr">#&gt;</span> Copied DLL from /tmp/RtmpkUSV6I/file244bcd2ba24b1a.so to /home/agsad.admin.ch/f80868656/.local/share/mkin/SFO_SFO.so</span>
 <span class="r-in"><span><span class="co"># Now we can save the model and restore it in a new session</span></span></span>
 <span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/base/readRDS.html" class="external-link">saveRDS</a></span><span class="op">(</span><span class="va">SFO_SFO.2</span>, file <span class="op">=</span> <span class="st">"~/SFO_SFO.rds"</span><span class="op">)</span></span></span>
 <span class="r-in"><span><span class="co"># Terminate the R session here if you would like to check, and then do</span></span></span>
@@ -383,7 +386,7 @@ Evaluating and Calculating Degradation Kinetics in Environmental Media</p>
 <span class="r-out co"><span class="r-pr">#&gt;</span>     })</span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>     return(predicted)</span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> }</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> &lt;environment: 0x55555f4ce060&gt;</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> &lt;environment: 0x560630960080&gt;</span>
 <span class="r-in"><span></span></span>
 <span class="r-in"><span><span class="co"># If we have several parallel metabolites</span></span></span>
 <span class="r-in"><span><span class="co"># (compare tests/testthat/test_synthetic_data_for_UBA_2014.R)</span></span></span>
-- 
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