From 396e40d2c45d81a8e74c41a2f632665021e980a1 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Tue, 26 Feb 2019 20:28:15 +0100 Subject: NAFTA SOP Attachment vignette Also: - Change rounding in print.nafta - Add dots argument to nafta() - Use cores=1 in examples - Restrict N in IORE model to values > 0 --- docs/reference/nafta.html | 19 ++++++++++++------- 1 file changed, 12 insertions(+), 7 deletions(-) (limited to 'docs/reference/nafta.html') diff --git a/docs/reference/nafta.html b/docs/reference/nafta.html index b1d45272..9b879786 100644 --- a/docs/reference/nafta.html +++ b/docs/reference/nafta.html @@ -133,7 +133,7 @@ - 
nafta(ds, title = NA, quiet = FALSE)
+ 
nafta(ds, title = NA, quiet = FALSE, …)

Arguments

@@ -153,6 +153,10 @@ + + + +
quiet

Should the evaluation text be shown?
…

Further arguments passed to mmkin.

Value

@@ -175,7 +179,8 @@

Examples

- 
  nafta_evaluation <- nafta(NAFTA_SOP_Appendix_D)
#> The SFO model is rejected as S_SFO is equal or higher than the critical value S_c
#> The representative half-life of the IORE model is longer than the one corresponding
#> to the terminal degradation rate found with the DFOP model.
#> The representative half-life obtained from the DFOP model may be used
  print(nafta_evaluation)
#> Sums of squares:
+    
  nafta_evaluation <- nafta(NAFTA_SOP_Appendix_D, cores = 1)
#> Warning: Calculation of the Jacobian failed for the cost function of the untransformed model.
+#> No t-test results will be available
#> The SFO model is rejected as S_SFO is equal or higher than the critical value S_c
#> The representative half-life of the IORE model is longer than the one corresponding
#> to the terminal degradation rate found with the DFOP model.
#> The representative half-life obtained from the DFOP model may be used
  print(nafta_evaluation)
#> Sums of squares:
 #>       SFO      IORE      DFOP 
 #> 1378.6832  615.7730  517.8836 
 #> 
@@ -191,8 +196,8 @@
 #> $IORE
 #>                         Estimate Pr(>t)        Lower        Upper
 #> parent_0            9.685291e+01     NA 8.752855e+01 1.061773e+02
-#> k__iore_parent_sink 8.403374e-14     NA 1.092054e-19 6.466412e-08
-#> N_parent            6.684458e+00     NA 3.538511e+00 9.830405e+00
+#> k__iore_parent_sink 8.403401e-14     NA 1.092058e-19 6.466429e-08
+#> N_parent            6.684457e+00     NA 3.538510e+00 9.830404e+00
 #> 
 #> $DFOP
 #>              Estimate       Pr(>t)        Lower        Upper
@@ -204,9 +209,9 @@
 #> 
 #> DTx values:
 #>      DT50    DT90 DT50_rep
-#> SFO   407    1352      407
-#> IORE  541 5192066  1562968
-#> DFOP  429    2383      841
+#> SFO   407    1350      407
+#> IORE  541 5190000  1560000
+#> DFOP  429    2380      841
 #> 
 #> Representative half-life:
 #> [1] 841.4096
  plot(nafta_evaluation)

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