From 91c5db736a4d3f2290a0cc5698fb4e35ae7bda59 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Wed, 18 May 2022 21:26:17 +0200 Subject: Remove outdated comment in FOCUS L vignette, update docs This also adds the first benchmark results obtained on my laptop system --- docs/reference/saem.html | 24 ++++++++++++------------ 1 file changed, 12 insertions(+), 12 deletions(-) (limited to 'docs/reference/saem.html') diff --git a/docs/reference/saem.html b/docs/reference/saem.html index cc597665..7e22e839 100644 --- a/docs/reference/saem.html +++ b/docs/reference/saem.html @@ -291,21 +291,21 @@ using mmkin.

#> log_k1 -2.5841 -3.6876 -1.4805 #> log_k2 -3.5228 -5.3254 -1.7203 #> g_qlogis -0.1027 -0.8719 0.6665 -#> a.1 1.8856 1.6676 2.1037 -#> SD.parent_0 2.7682 0.7668 4.7695 +#> a.1 1.8856 1.6770 2.0943 +#> SD.parent_0 2.7682 0.7669 4.7695 #> SD.log_k_A1 1.7447 0.4047 3.0848 #> SD.f_parent_qlogis 0.4525 0.1620 0.7431 #> SD.log_k1 1.2423 0.4560 2.0285 #> SD.log_k2 2.0390 0.7601 3.3180 -#> SD.g_qlogis 0.4439 -0.3069 1.1947 +#> SD.g_qlogis 0.4439 -0.3068 1.1946 plot(f_saem_dfop_sfo) summary(f_saem_dfop_sfo, data = TRUE) #> saemix version used for fitting: 3.0 #> mkin version used for pre-fitting: 1.1.0 -#> R version used for fitting: 4.1.2 -#> Date of fit: Mon Mar 7 13:15:26 2022 -#> Date of summary: Mon Mar 7 13:15:26 2022 +#> R version used for fitting: 4.2.0 +#> Date of fit: Wed May 18 20:41:57 2022 +#> Date of summary: Wed May 18 20:41:57 2022 #> #> Equations: #> d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 * @@ -320,7 +320,7 @@ using mmkin.

#> #> Model predictions using solution type analytical #> -#> Fitted in 8.741 s +#> Fitted in 9.745 s #> Using 300, 100 iterations and 10 chains #> #> Variance model: Constant variance @@ -359,16 +359,16 @@ using mmkin.

#> #> Random effects: #> est. lower upper -#> SD.parent_0 2.7682 0.7668 4.7695 +#> SD.parent_0 2.7682 0.7669 4.7695 #> SD.log_k_A1 1.7447 0.4047 3.0848 #> SD.f_parent_qlogis 0.4525 0.1620 0.7431 #> SD.log_k1 1.2423 0.4560 2.0285 #> SD.log_k2 2.0390 0.7601 3.3180 -#> SD.g_qlogis 0.4439 -0.3069 1.1947 +#> SD.g_qlogis 0.4439 -0.3068 1.1946 #> #> Variance model: #> est. lower upper -#> a.1 1.886 1.668 2.104 +#> a.1 1.886 1.677 2.094 #> #> Backtransformed parameters: #> est. lower upper @@ -554,7 +554,7 @@ using mmkin.

#> Dataset 10 A1 21 6.4 7.59693 -1.19693 1.886 -0.634761 #> Dataset 10 A1 21 7.2 7.59693 -0.39693 1.886 -0.210502 #> Dataset 10 A1 41 9.1 9.86436 -0.76436 1.886 -0.405361 -#> Dataset 10 A1 41 8.5 9.86436 -1.36436 1.886 -0.723555 +#> Dataset 10 A1 41 8.5 9.86436 -1.36436 1.886 -0.723556 #> Dataset 10 A1 63 11.7 10.99397 0.70603 1.886 0.374425 #> Dataset 10 A1 63 12.0 10.99397 1.00603 1.886 0.533522 #> Dataset 10 A1 91 13.3 11.91274 1.38726 1.886 0.735696 @@ -589,7 +589,7 @@ using mmkin.

-

Site built with pkgdown 2.0.2.

+

Site built with pkgdown 2.0.3.

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