From 1ef7008be2a72a0847064ad9c2ddcfa16b055482 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Fri, 3 May 2019 19:14:15 +0200 Subject: Improve error model fitting Now we have a three stage fitting process for nonconstant error models: - Unweighted least squares - Only optimize the error model - Optimize both Static documentation rebuilt by pkgdown --- docs/reference/schaefer07_complex_case.html | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) (limited to 'docs/reference/schaefer07_complex_case.html') diff --git a/docs/reference/schaefer07_complex_case.html b/docs/reference/schaefer07_complex_case.html index f645e6a7..09f6d1e2 100644 --- a/docs/reference/schaefer07_complex_case.html +++ b/docs/reference/schaefer07_complex_case.html @@ -167,7 +167,7 @@ A2 = list(type = "SFO"), use_of_ff = "max")
#> Successfully compiled differential equation model from auto-generated C code.
fit <- mkinfit(model, data, quiet = TRUE) plot(fit)
endpoints(fit)
#> $ff #> parent_A1 parent_B1 parent_C1 parent_sink A1_A2 A1_sink -#> 0.3809619 0.1954667 0.4235714 0.0000000 0.4479603 0.5520397 +#> 0.3809619 0.1954667 0.4235714 0.0000000 0.4479620 0.5520380 #> #> $SFORB #> logical(0) @@ -175,10 +175,10 @@ #> $distimes #> DT50 DT90 #> parent 13.95078 46.34350 -#> A1 49.75343 165.27733 -#> B1 37.26907 123.80518 -#> C1 11.23131 37.30959 -#> A2 28.50644 94.69635 +#> A1 49.75344 165.27737 +#> B1 37.26907 123.80517 +#> C1 11.23131 37.30960 +#> A2 28.50627 94.69577 #>
# Compare with the results obtained in the original publication print(schaefer07_complex_results)
#> compound parameter KinGUI ModelMaker deviation #> 1 parent degradation rate 0.0496 0.0506 2.0 -- cgit v1.2.1