From e5d1df9a9b1f0951d7dfbaf24eee4294470b73e2 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Thu, 17 Nov 2022 14:54:20 +0100 Subject: Complete update of online docs for v1.2.0 --- docs/reference/schaefer07_complex_case.html | 44 ++++++++++++++++------------- 1 file changed, 25 insertions(+), 19 deletions(-) (limited to 'docs/reference/schaefer07_complex_case.html') diff --git a/docs/reference/schaefer07_complex_case.html b/docs/reference/schaefer07_complex_case.html index e1032453..365f2e4c 100644 --- a/docs/reference/schaefer07_complex_case.html +++ b/docs/reference/schaefer07_complex_case.html @@ -19,7 +19,7 @@ mkin - 1.1.0 + 1.2.0 @@ -46,11 +46,14 @@ Example evaluations of dimethenamid data from 2018 with nonlinear mixed-effects models
  • - Example evaluation of FOCUS Example Dataset Z + Short demo of the multistart method
  • Performance benefit by using compiled model definitions in mkin
    • +
  • + Example evaluation of FOCUS Example Dataset Z +
  • Calculation of time weighted average concentrations with mkin
    • @@ -58,7 +61,10 @@ Example evaluation of NAFTA SOP Attachment examples
  • - Some benchmark timings + Benchmark timings for mkin +
    • +
  • + Benchmark timings for saem.mmkin
  • @@ -91,7 +97,7 @@
    - 
    schaefer07_complex_case
    + 
    schaefer07_complex_case
    @@ -127,19 +133,19 @@

    Examples

    - 
    data <- mkin_wide_to_long(schaefer07_complex_case, time = "time")
-model <- mkinmod(
-  parent = list(type = "SFO", to = c("A1", "B1", "C1"), sink = FALSE),
-  A1 = list(type = "SFO", to = "A2"),
-  B1 = list(type = "SFO"),
-  C1 = list(type = "SFO"),
-  A2 = list(type = "SFO"), use_of_ff = "max")
+    
    data <- mkin_wide_to_long(schaefer07_complex_case, time = "time")
+model <- mkinmod(
+  parent = list(type = "SFO", to = c("A1", "B1", "C1"), sink = FALSE),
+  A1 = list(type = "SFO", to = "A2"),
+  B1 = list(type = "SFO"),
+  C1 = list(type = "SFO"),
+  A2 = list(type = "SFO"), use_of_ff = "max")
 #> Temporary DLL for differentials generated and loaded
-  # \dontrun{
-    fit <- mkinfit(model, data, quiet = TRUE)
-    plot(fit)
+  # \dontrun{
+    fit <- mkinfit(model, data, quiet = TRUE)
+    plot(fit)
 
-    endpoints(fit)
+    endpoints(fit)
 #> $ff
 #>   parent_A1   parent_B1   parent_C1 parent_sink       A1_A2     A1_sink 
 #>   0.3809620   0.1954667   0.4235713   0.0000000   0.4479619   0.5520381 
@@ -152,9 +158,9 @@
 #> C1     11.23131  37.30961
 #> A2     28.50624  94.69567
 #> 
-  # }
- # Compare with the results obtained in the original publication
- print(schaefer07_complex_results)
+  # }
+ # Compare with the results obtained in the original publication
+ print(schaefer07_complex_results)
 #>         compound          parameter  KinGUI ModelMaker deviation
 #> 1         parent   degradation rate  0.0496     0.0506       2.0
 #> 2         parent               DT50 13.9900    13.6900       2.2
@@ -184,7 +190,7 @@
 
    
 
 
    
-  
    Site built with pkgdown 2.0.2.
    
+  
    Site built with pkgdown 2.0.6.
    -- cgit v1.2.1