From cf54ccca37d27480dbf8d59eb027300518f7ad75 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Fri, 19 May 2023 17:08:43 +0200 Subject: Prepare release of v1.2.4 - Update DESCRIPTION - Update Makefile to document how to use R-patched - Remove markup from two URLs to avoid CRAN NOTE - Switch two vignettes from html_document to html_vignette to save space in the docs directory, also avoiding a CRAN NOTE - Complete rebuild of pkgdown docs for release --- docs/reference/summary.nlme.mmkin.html | 26 +++++++++++++------------- 1 file changed, 13 insertions(+), 13 deletions(-) (limited to 'docs/reference/summary.nlme.mmkin.html') diff --git a/docs/reference/summary.nlme.mmkin.html b/docs/reference/summary.nlme.mmkin.html index 64ae46c4..33d8c01d 100644 --- a/docs/reference/summary.nlme.mmkin.html +++ b/docs/reference/summary.nlme.mmkin.html @@ -21,7 +21,7 @@ endpoints such as formation fractions and DT50 values. Optionally mkin - 1.2.3 + 1.2.4 @@ -252,10 +252,10 @@ José Pinheiro and Douglas Bates for the components inherited from nlme

f_nlme <- nlme(f_mmkin) summary(f_nlme, data = TRUE) #> nlme version used for fitting: 3.1.162 -#> mkin version used for pre-fitting: 1.2.3 -#> R version used for fitting: 4.2.3 -#> Date of fit: Thu Apr 20 07:36:43 2023 -#> Date of summary: Thu Apr 20 07:36:43 2023 +#> mkin version used for pre-fitting: 1.2.4 +#> R version used for fitting: 4.3.0 +#> Date of fit: Fri May 19 09:19:53 2023 +#> Date of summary: Fri May 19 09:19:53 2023 #> #> Equations: #> d_parent/dt = - k_parent * parent @@ -265,7 +265,7 @@ José Pinheiro and Douglas Bates for the components inherited from nlme

#> #> Model predictions using solution type analytical #> -#> Fitted in 0.187 s using 4 iterations +#> Fitted in 0.175 s using 4 iterations #> #> Variance model: Two-component variance function #> @@ -294,15 +294,15 @@ José Pinheiro and Douglas Bates for the components inherited from nlme

#> Formula: list(parent_0 ~ 1, log_k_parent ~ 1) #> Level: ds #> Structure: Diagonal -#> parent_0 log_k_parent Residual -#> StdDev: 6.92e-05 0.5863 1 +#> parent_0 log_k_parent Residual +#> StdDev: 6.921e-05 0.5863 1 #> #> Variance function: #> Structure: Constant plus proportion of variance covariate #> Formula: ~fitted(.) #> Parameter estimates: #> const prop -#> 0.0001208154 0.0789968021 +#> 0.0001208313 0.0789967985 #> #> Backtransformed parameters with asymmetric confidence intervals: #> lower est. upper @@ -352,7 +352,7 @@ José Pinheiro and Douglas Bates for the components inherited from nlme

#> ds 2 parent 120 15.2 16.366 -1.16561 1.2928 -0.901595 #> ds 2 parent 120 15.5 16.366 -0.86561 1.2928 -0.669547 #> ds 3 parent 0 97.7 101.592 -3.89243 8.0255 -0.485009 -#> ds 3 parent 0 88.2 101.592 -13.39243 8.0255 -1.668739 +#> ds 3 parent 0 88.2 101.592 -13.39243 8.0255 -1.668740 #> ds 3 parent 1 109.9 99.218 10.68196 7.8379 1.362858 #> ds 3 parent 1 97.8 99.218 -1.41804 7.8379 -0.180921 #> ds 3 parent 3 100.5 94.634 5.86555 7.4758 0.784603 @@ -366,7 +366,7 @@ José Pinheiro and Douglas Bates for the components inherited from nlme

#> ds 3 parent 60 25.1 24.582 0.51786 1.9419 0.266676 #> ds 3 parent 60 21.4 24.582 -3.18214 1.9419 -1.638664 #> ds 3 parent 90 11.0 12.092 -1.09202 0.9552 -1.143199 -#> ds 3 parent 90 14.2 12.092 2.10798 0.9552 2.206776 +#> ds 3 parent 90 14.2 12.092 2.10798 0.9552 2.206777 #> ds 3 parent 120 5.8 5.948 -0.14810 0.4699 -0.315178 #> ds 3 parent 120 6.1 5.948 0.15190 0.4699 0.323282 #> ds 4 parent 0 95.3 101.592 -6.29243 8.0255 -0.784057 @@ -381,8 +381,8 @@ José Pinheiro and Douglas Bates for the components inherited from nlme

#> ds 4 parent 14 104.8 95.234 9.56590 7.5232 1.271521 #> ds 4 parent 28 85.0 89.274 -4.27372 7.0523 -0.606001 #> ds 4 parent 28 77.2 89.274 -12.07372 7.0523 -1.712017 -#> ds 4 parent 60 82.2 77.013 5.18660 6.0838 0.852526 -#> ds 4 parent 60 86.1 77.013 9.08660 6.0838 1.493571 +#> ds 4 parent 60 82.2 77.013 5.18661 6.0838 0.852526 +#> ds 4 parent 60 86.1 77.013 9.08661 6.0838 1.493571 #> ds 4 parent 90 70.5 67.053 3.44692 5.2970 0.650733 #> ds 4 parent 90 61.7 67.053 -5.35308 5.2970 -1.010591 #> ds 4 parent 120 60.0 58.381 1.61905 4.6119 0.351058 -- cgit v1.2.1