From 6476f5f49b373cd4cf05f2e73389df83e437d597 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Thu, 13 Feb 2025 16:30:31 +0100 Subject: Axis legend formatting, update vignettes --- docs/reference/tffm0.html | 165 ---------------------------------------------- 1 file changed, 165 deletions(-) delete mode 100644 docs/reference/tffm0.html (limited to 'docs/reference/tffm0.html') diff --git a/docs/reference/tffm0.html b/docs/reference/tffm0.html deleted file mode 100644 index bc033fb3..00000000 --- a/docs/reference/tffm0.html +++ /dev/null @@ -1,165 +0,0 @@ - -Transform formation fractions as in the first published mkin version — tffm0 • mkin - - -
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-

This transformation was used originally in mkin, in order to implement a -constraint for the sum of formation fractions to be smaller than 1. It was -later replaced by the ilr transformation because the ilr transformed -fractions can assumed to follow normal distribution. As the ilr -transformation is not available in RxODE and can therefore not be used in -the nlmixr modelling language, the original transformation is currently used -for translating mkin models with formation fractions to more than one target -compartment for fitting with nlmixr in nlmixr_model. However, this -implementation cannot be used there, as it is not accessible from RxODE.

-
- -
-
tffm0(ff)
-
-invtffm0(ff_trans)
-
- -
-

Arguments

-
ff
-

Vector of untransformed formation fractions. The sum -must be smaller or equal to one

-
ff_trans
-

Vector of transformed formation fractions that can be -restricted to the interval from 0 to 1

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-
-

Value

-

A vector of the transformed formation fractions -A vector of backtransformed formation fractions for natural use in degradation models

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Details

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If the transformed formation fractions are restricted to the interval -between 0 and 1, the sum of backtransformed values is restricted -to this interval.

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- -
-

Examples

-
ff_example <- c(
-  0.10983681, 0.09035905, 0.08399383
-)
-ff_example_trans <- tffm0(ff_example)
-invtffm0(ff_example_trans)
-#> [1] 0.10983681 0.09035905 0.08399383
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- - - - - - - - -- cgit v1.2.1