From 0b677308e3ffbf742880f05cc54da469f3ecc854 Mon Sep 17 00:00:00 2001
From: Johannes Ranke <jranke@uni-bremen.de>
Date: Fri, 9 Mar 2018 23:14:39 +0100
Subject: Another rebuild of the static docs

Now with rbenchmark installed, to get results for the compiled_models
vignette
---
 docs/reference/transform_odeparms.html | 18 +++---------------
 1 file changed, 3 insertions(+), 15 deletions(-)

(limited to 'docs/reference/transform_odeparms.html')

diff --git a/docs/reference/transform_odeparms.html b/docs/reference/transform_odeparms.html
index 630a5103..266db603 100644
--- a/docs/reference/transform_odeparms.html
+++ b/docs/reference/transform_odeparms.html
@@ -27,18 +27,6 @@
 <script src="../pkgdown.js"></script>
   
   
-<meta property="og:title" content="Functions to transform and backtransform kinetic parameters for fitting — transform_odeparms" />
-
-<meta property="og:description" content="The transformations are intended to map parameters that should only take
-  on restricted values to the full scale of real numbers. For kinetic rate
-  constants and other paramters that can only take on positive values, a
-  simple log transformation is used. For compositional parameters, such as
-  the formations fractions that should always sum up to 1 and can not be
-  negative, the ilr transformation is used.
-The transformation of sets of formation fractions is fragile, as it supposes
-  the same ordering of the components in forward and backward transformation.
-  This is no problem for the internal use in mkinfit." />
-<meta name="twitter:card" content="summary" />
 <!-- mathjax -->
 <script src='https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML'></script>
 
@@ -185,8 +173,8 @@ The transformation of sets of formation fractions is fragile, as it supposes
 <span class='no'>fit</span> <span class='kw'>&lt;-</span> <span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='no'>SFO_SFO</span>, <span class='no'>FOCUS_2006_D</span>, <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>)
 <span class='fu'>summary</span>(<span class='no'>fit</span>, <span class='kw'>data</span><span class='kw'>=</span><span class='fl'>FALSE</span>) <span class='co'># See transformed and backtransformed parameters</span></div><div class='output co'>#&gt; mkin version used for fitting:    0.9.47.1 
 #&gt; R version used for fitting:       3.4.3 
-#&gt; Date of fit:     Thu Mar  1 14:26:28 2018 
-#&gt; Date of summary: Thu Mar  1 14:26:28 2018 
+#&gt; Date of fit:     Fri Mar  9 23:08:30 2018 
+#&gt; Date of summary: Fri Mar  9 23:08:30 2018 
 #&gt; 
 #&gt; Equations:
 #&gt; d_parent/dt = - k_parent_sink * parent - k_parent_m1 * parent
@@ -194,7 +182,7 @@ The transformation of sets of formation fractions is fragile, as it supposes
 #&gt; 
 #&gt; Model predictions using solution type deSolve 
 #&gt; 
-#&gt; Fitted with method Port using 153 model solutions performed in 0.571 s
+#&gt; Fitted with method Port using 153 model solutions performed in 0.657 s
 #&gt; 
 #&gt; Weighting: none
 #&gt; 
-- 
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