Estimation of parameter distributions from mmkin row objects

From a98733db782ce3e9446dda187c34703f61916806 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Sat, 4 Apr 2020 16:50:20 +0200 Subject: Static documentation rebuilt by pkgdown --- docs/reference/index.html | 6 ++ docs/reference/mkinsub.html | 11 +-- docs/reference/nlme.html | 199 ++++++++++++++++++++++++++++++++++++++++++++ 3 files changed, 211 insertions(+), 5 deletions(-) create mode 100644 docs/reference/nlme.html (limited to 'docs/reference') diff --git a/docs/reference/index.html b/docs/reference/index.html index 6ccc9255..a3547e29 100644 --- a/docs/reference/index.html +++ b/docs/reference/index.html @@ -270,6 +270,12 @@ of an mmkin object

AIC(<mmkin>) BIC(<mmkin>)

Calculate the AIC for a column of an mmkin object

+ + + +

mean_degparms() nlme_data() nlme_function()

+ +

Estimation of parameter distributions from mmkin row objects

diff --git a/docs/reference/mkinsub.html b/docs/reference/mkinsub.html index e38c153c..b3be7c2c 100644 --- a/docs/reference/mkinsub.html +++ b/docs/reference/mkinsub.html @@ -70,7 +70,7 @@ mkinmod." /> @@ -181,10 +181,11 @@ results on other operating systems or system configurations.

SFO_SFO.2 <- mkinmod( parent = mkinsub("SFO", "m1"), m1 = mkinsub("SFO"))

#> Successfully compiled differential equation model from auto-generated C code.

-# Now supplying full names -SFO_SFO.2 <- mkinmod( - parent = mkinsub("SFO", "m1", full_name = "Test compound"), - m1 = mkinsub("SFO", full_name = "Metabolite M1"))

#> Successfully compiled differential equation model from auto-generated C code.

+# \dontrun{ + # Now supplying full names + SFO_SFO.2 <- mkinmod( + parent = mkinsub("SFO", "m1", full_name = "Test compound"), + m1 = mkinsub("SFO", full_name = "Metabolite M1"))

#> Successfully compiled differential equation model from auto-generated C code.

# }

diff --git a/docs/reference/nlme.html b/docs/reference/nlme.html new file mode 100644 index 00000000..b939d1c3 --- /dev/null +++ b/docs/reference/nlme.html @@ -0,0 +1,199 @@ + + + + + + + + +Estimation of parameter distributions from mmkin row objects — mean_degparms • mkin + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

+ + + + +

+ +

+ + +

This function sets up and attempts to fit a mixed effects model to +an mmkin row object. An mmkin row object is essentially a list of mkinfit +objects that have been obtained by fitting the same model to a list of +datasets.

+ +

mean_degparms(object)
+
+nlme_data(object)
+
+nlme_function(object)

+ +

Arguments

+ + + + + + +

object	An mmkin row object containing several fits of the same model to different datasets

+ +

Value

+ +

A named vector containing mean values of the fitted degradation model parameters

A groupedData data object

A function that can be used with nlme

+ +

Examples

+ +

+ + + +

+ + + + + + + + -- cgit v1.2.1

Estimation of parameter distributions from mmkin row objects

Arguments

Value

Examples

Contents