From 051268e3b1680792fbe3c5fccaecc09e74660d0f Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Mon, 8 Aug 2022 11:03:32 +0200 Subject: Error on unsupported saemix transformations Also, support FOMC with saemix transformations --- log/test.log | 18 +++++++++--------- 1 file changed, 9 insertions(+), 9 deletions(-) (limited to 'log') diff --git a/log/test.log b/log/test.log index 776b6f49..67ba8841 100644 --- a/log/test.log +++ b/log/test.log @@ -5,12 +5,12 @@ ✔ | 5 | Calculation of Akaike weights ✔ | 3 | Export dataset for reading into CAKE ✔ | 12 | Confidence intervals and p-values [1.0s] -✔ | 1 12 | Dimethenamid data from 2018 [32.0s] +✔ | 1 12 | Dimethenamid data from 2018 [32.9s] ──────────────────────────────────────────────────────────────────────────────── Skip (test_dmta.R:98:3): Different backends get consistent results for SFO-SFO3+, dimethenamid data Reason: Fitting this ODE model with saemix takes about 15 minutes on my system ──────────────────────────────────────────────────────────────────────────────── -✔ | 14 | Error model fitting [5.1s] +✔ | 14 | Error model fitting [5.0s] ✔ | 5 | Time step normalisation ✔ | 4 | Calculation of FOCUS chi2 error levels [0.6s] ✔ | 14 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [0.8s] @@ -27,23 +27,23 @@ Reason: Fitting with saemix takes around 10 minutes when using deSolve ✔ | 8 | mkinmod model generation and printing [0.2s] ✔ | 3 | Model predictions with mkinpredict [0.4s] ✔ | 16 | Evaluations according to 2015 NAFTA guidance [1.8s] -✔ | 9 | Nonlinear mixed-effects models with nlme [9.1s] -✔ | 16 | Plotting [10.7s] +✔ | 9 | Nonlinear mixed-effects models with nlme [8.3s] +✔ | 16 | Plotting [10.6s] ✔ | 4 | Residuals extracted from mkinfit models -✔ | 27 | saemix parent models [178.6s] +✔ | 28 | saemix parent models [182.2s] ✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [1.4s] -✔ | 7 | Fitting the SFORB model [3.6s] +✔ | 7 | Fitting the SFORB model [3.9s] ✔ | 1 | Summaries of old mkinfit objects ✔ | 5 | Summary [0.2s] ✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [2.1s] -✔ | 9 | Hypothesis tests [7.8s] +✔ | 9 | Hypothesis tests [7.7s] ✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) [2.2s] ══ Results ═════════════════════════════════════════════════════════════════════ -Duration: 263.0 s +Duration: 266.8 s ── Skipped tests ────────────────────────────────────────────────────────────── • Fitting this ODE model with saemix takes about 15 minutes on my system (1) • Fitting with saemix takes around 10 minutes when using deSolve (1) -[ FAIL 0 | WARN 0 | SKIP 2 | PASS 227 ] +[ FAIL 0 | WARN 0 | SKIP 2 | PASS 228 ] -- cgit v1.2.1