From e338c9a5a8da42e5f7b8940b96d150752767d75a Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Tue, 19 May 2015 10:46:30 +0200 Subject: Include output in README, use mkinsub() in example code --- man/mkinmod.Rd | 20 +++++++++++++++++++- 1 file changed, 19 insertions(+), 1 deletion(-) (limited to 'man/mkinmod.Rd') diff --git a/man/mkinmod.Rd b/man/mkinmod.Rd index 4de4c98a..f6a8fe5d 100644 --- a/man/mkinmod.Rd +++ b/man/mkinmod.Rd @@ -77,12 +77,30 @@ mkinmod(..., use_of_ff = "min", speclist = NULL, quiet = FALSE) Johannes Ranke } \examples{ -# Specify the SFO model +# Specify the SFO model (this is not needed any more, as we can now mkinfit("SFO", ...) SFO <- mkinmod(parent = list(type = "SFO")) # One parent compound, one metabolite, both single first order. +SFO_SFO <- mkinmod( + parent = mkinsub("SFO", "m1"), + m1 = mkinsub("SFO")) + +# The above model used to be specified like this, before the advent of mkinsub() SFO_SFO <- mkinmod( parent = list(type = "SFO", to = "m1"), m1 = list(type = "SFO")) + +# If we have several parallel metabolites +# (compare tests/testthat/test_synthetic_data_for_UBA_2014.R) +m_synth_DFOP_par <- mkinmod(parent = mkinsub("DFOP", c("M1", "M2")), + M1 = mkinsub("SFO"), + M2 = mkinsub("SFO"), + use_of_ff = "max", quiet = TRUE) + +\dontrun{ +fit_DFOP_par_c <- mkinfit(m_synth_DFOP_par, + synthetic_data_for_UBA_2014[[12]]$data, + quiet = TRUE) +} } \keyword{ models } -- cgit v1.2.1