From f0ef23a7598e5d19648ae4edc2b74e0fba27a41c Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Wed, 3 Feb 2021 16:41:31 +0100 Subject: Prepare for v1.0.0 - Improve authorship and copyright information - Prepare pkgdown config - Remove dependence on saemix as we need the development version which is not ready for CRAN - Temporarily remove saemix interface to check code coverage of the rest --- man/plot.mixed.mmkin.Rd | 13 ++----------- 1 file changed, 2 insertions(+), 11 deletions(-) (limited to 'man/plot.mixed.mmkin.Rd') diff --git a/man/plot.mixed.mmkin.Rd b/man/plot.mixed.mmkin.Rd index c7b2344f..87a82286 100644 --- a/man/plot.mixed.mmkin.Rd +++ b/man/plot.mixed.mmkin.Rd @@ -17,7 +17,7 @@ maxabs = "auto", ncol.legend = ifelse(length(i) <= 3, length(i) + 1, ifelse(length(i) <= 8, 3, 4)), nrow.legend = ceiling((length(i) + 1)/ncol.legend), - rel.height.legend = 0.03 + 0.08 * nrow.legend, + rel.height.legend = 0.02 + 0.07 * nrow.legend, rel.height.bottom = 1.1, pch_ds = 1:length(i), col_ds = pch_ds + 1, @@ -27,7 +27,7 @@ ) } \arguments{ -\item{x}{An object of class \link{mixed.mmkin}, \link{saem.mmkin} or \link{nlme.mmkin}} +\item{x}{An object of class \link{mixed.mmkin}, \link{nlme.mmkin}} \item{i}{A numeric index to select datasets for which to plot the individual predictions, in case plots get too large} @@ -94,15 +94,6 @@ plot(f[, 3:4], standardized = TRUE) f_nlme <- nlme(f, control = list(pnlsMaxIter = 120, tolerance = 1e-3)) plot(f_nlme) -f_saem <- saem(f, transformations = "saemix") -plot(f_saem) - -# We can overlay the two variants if we generate predictions -pred_nlme <- mkinpredict(dfop_sfo, - f_nlme$bparms.optim[-1], - c(parent = f_nlme$bparms.optim[[1]], A1 = 0), - seq(0, 180, by = 0.2)) -plot(f_saem, pred_over = list(nlme = pred_nlme)) } } \author{ -- cgit v1.2.1