From 95178837d3f91e84837628446b5fd468179af2b9 Mon Sep 17 00:00:00 2001 From: Johannes Ranke Date: Tue, 4 Jun 2019 15:09:28 +0200 Subject: Additional algorithm "d_c", more tests, docs The new algorithm tries direct optimization of the likelihood, as well as a three step procedure. In this way, we consistently get the model with the highest likelihood for SFO, DFOP and HS for all 12 new test datasets. --- man/plot.mkinfit.Rd | 2 ++ 1 file changed, 2 insertions(+) (limited to 'man/plot.mkinfit.Rd') diff --git a/man/plot.mkinfit.Rd b/man/plot.mkinfit.Rd index 9514c5e5..5e20ad90 100644 --- a/man/plot.mkinfit.Rd +++ b/man/plot.mkinfit.Rd @@ -115,6 +115,7 @@ plot_sep(fit, sep_obs = TRUE, show_residuals = TRUE, show_errmin = TRUE, \dots) \examples{ # One parent compound, one metabolite, both single first order, path from # parent to sink included +\dontrun{ SFO_SFO <- mkinmod(parent = mkinsub("SFO", "m1", full = "Parent"), m1 = mkinsub("SFO", full = "Metabolite M1" )) fit <- mkinfit(SFO_SFO, FOCUS_2006_D, quiet = TRUE, error_model = "tc") @@ -136,6 +137,7 @@ plot_sep(fit, lpos = c("topright", "bottomright")) plot(fit, sep_obs = TRUE, show_errplot = TRUE, lpos = c("topright", "bottomright"), show_errmin = TRUE) } +} \author{ Johannes Ranke } -- cgit v1.2.1