From 300aa6ec27529f46deda07874566dc8fcee4e6e7 Mon Sep 17 00:00:00 2001
From: Johannes Ranke <jranke@uni-bremen.de>
Date: Mon, 31 Oct 2022 17:01:58 +0100
Subject: Fix R CMD check

---
 man/anova.saem.mmkin.Rd | 6 ++++--
 man/mhmkin.Rd           | 7 ++++++-
 man/saem.Rd             | 4 ++++
 3 files changed, 14 insertions(+), 3 deletions(-)

(limited to 'man')

diff --git a/man/anova.saem.mmkin.Rd b/man/anova.saem.mmkin.Rd
index ab6022bc..34711c41 100644
--- a/man/anova.saem.mmkin.Rd
+++ b/man/anova.saem.mmkin.Rd
@@ -31,6 +31,8 @@ only be done for nested models.}
 an "anova" data frame; the traditional (S3) result of anova()
 }
 \description{
-Generate an anova object. The method to calculate the BIC is that from
-the saemix package. As in other prominent anova methods, models are sorted
+Generate an anova object. The method to calculate the BIC is that from the
+saemix package. As in other prominent anova methods, models are sorted by
+number of parameters, and the tests (if requested) are always relative to
+the model on the previous line.
 }
diff --git a/man/mhmkin.Rd b/man/mhmkin.Rd
index 0ef1599e..1a6e3869 100644
--- a/man/mhmkin.Rd
+++ b/man/mhmkin.Rd
@@ -2,6 +2,7 @@
 % Please edit documentation in R/mhmkin.R
 \name{mhmkin}
 \alias{mhmkin}
+\alias{mhmkin.mmkin}
 \alias{mhmkin.list}
 \alias{[.mhmkin}
 \alias{print.mhmkin}
@@ -10,6 +11,8 @@ degradation models and one or more error models}
 \usage{
 mhmkin(objects, backend = "saemix", algorithm = "saem", ...)
 
+\method{mhmkin}{mmkin}(objects, ...)
+
 \method{mhmkin}{list}(
   objects,
   backend = "saemix",
@@ -24,7 +27,9 @@ mhmkin(objects, backend = "saemix", algorithm = "saem", ...)
 }
 \arguments{
 \item{objects}{A list of \link{mmkin} objects containing fits of the same
-degradation models to the same data, but using different error models.}
+degradation models to the same data, but using different error models.
+Alternatively, a single \link{mmkin} object containing fits of several
+degradation models to the same data}
 
 \item{backend}{The backend to be used for fitting. Currently, only saemix is
 supported}
diff --git a/man/saem.Rd b/man/saem.Rd
index d7b04691..9167b51f 100644
--- a/man/saem.Rd
+++ b/man/saem.Rd
@@ -14,6 +14,7 @@ saem(object, ...)
 \method{saem}{mmkin}(
   object,
   transformations = c("mkin", "saemix"),
+  error_model = "auto",
   degparms_start = numeric(),
   test_log_parms = TRUE,
   conf.level = 0.6,
@@ -37,6 +38,7 @@ saemix_model(
   object,
   solution_type = "auto",
   transformations = c("mkin", "saemix"),
+  error_model = "auto",
   degparms_start = numeric(),
   covariance.model = "auto",
   no_random_effect = NULL,
@@ -64,6 +66,8 @@ are done in 'saemix' for the supported cases, i.e. (as of version 1.1.2)
 SFO, FOMC, DFOP and HS without fixing \code{parent_0}, and SFO or DFOP with
 one SFO metabolite.}
 
+\item{error_model}{Possibility to override the error model used in the mmkin object}
+
 \item{degparms_start}{Parameter values given as a named numeric vector will
 be used to override the starting values obtained from the 'mmkin' object.}
 
-- 
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